RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 WDR61Q9GZS3 305 aaKnown RBP10.98□□□□□ -0.65
PTPN7-217ENST00000495688 OPA3Q9H6K4 179 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 MAP1LC3B2A6NCE7 125 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 NPIPB11E5RHQ5 1161 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 PSPNO60542 156 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 NXPH2O95156 264 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 TRGC1P0CF51 173 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 C1orf210Q8IVY1 113 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 MAP1LC3BQ9GZQ8 125 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 LIN7CQ9NUP9 197 aaKnown RBP10.97□□□□□ -0.65
PTPN7-217ENST00000495688 CLDN1O95832 211 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 DEFA4P12838 97 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 S100A2P29034 98 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 G6PCP35575 357 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 IDH3GP51553 393 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-217ENST00000495688 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 RPL30P62888 115 aaKnown RBP10.97□□□□□ -0.65
PTPN7-217ENST00000495688 HBG1P69891 147 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 HBG2P69892 147 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 ZNF816Q0VGE8 651 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-217ENST00000495688 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-217ENST00000495688 OR10G4Q8NGN3 311 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 OR1L1Q8NH94 360 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 SDF2L1Q9HCN8 221 aa10.97□□□□□ -0.65
PTPN7-217ENST00000495688 TMEM265A0A087WTH1 108 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 SLC38A11Q08AI6 406 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 RNFT1Q5M7Z0 435 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 ATP1A1-AS1Q5TC04 95 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 FBXW9Q5XUX1 488 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTPN7-217ENST00000495688 PSMG3Q9BT73 122 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-217ENST00000495688 IER2Q9BTL4 223 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 RTL8AQ9BWD3 113 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 STRADBQ9C0K7 418 aa10.96□□□□□ -0.65
PTPN7-217ENST00000495688 WNT9BO14905 357 aa10.96□□□□□ -0.66
PTPN7-217ENST00000495688 SP1P08047 785 aa10.96□□□□□ -0.66
PTPN7-217ENST00000495688 NKX6-1P78426 367 aaPredicted RBP10.96□□□□□ -0.66
PTPN7-217ENST00000495688 ZNF826PQ6ZT77 177 aa10.96□□□□□ -0.66
PTPN7-217ENST00000495688 ZNF383Q8NA42 475 aa10.96□□□□□ -0.66
PTPN7-217ENST00000495688 CLN8Q9UBY8 286 aa10.96□□□□□ -0.66
PTPN7-217ENST00000495688 CLDN34H7C241 214 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 SMPD2O60906 423 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 CYB5R3P00387 301 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-217ENST00000495688 PGA5P0DJD9 388 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 CD81P60033 236 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 TMEM41BQ5BJD5 291 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 SPINK9Q5DT21 86 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 WDR25Q64LD2 544 aaPredicted RBP10.95□□□□□ -0.66
PTPN7-217ENST00000495688 ACSM6Q6P461 480 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 GCNT2Q8N0V5 402 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 HIST3H2BBQ8N257 126 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 GATAD1Q8WUU5 269 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 LHX4Q969G2 390 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 OR2D2Q9H210 308 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
PTPN7-217ENST00000495688 VAX2Q9UIW0 290 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 DCHS1Q96JQ0 3298 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 SVILO95425 2214 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 LRP5LA4QPB2 252 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 B4DEV8 164 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 PPP1R2P9O14990 202 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 ZNF737O75373 536 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 WNT2P09544 360 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 OR3A1P47881 315 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 PPP1CBP62140 327 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 SERF2P84101 59 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 TNFRSF9Q07011 255 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 BTNL3Q6UXE8 466 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 C1orf87Q8N0U7 546 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 NECAP1Q8NC96 275 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 OR52L2PQ8NGH6 319 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 ZDHHC16Q969W1 377 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 ZPBPQ9BS86 351 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 ABI3Q9P2A4 366 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 SPRR3Q9UBC9 169 aa10.95□□□□□ -0.66
PTPN7-217ENST00000495688 LYZL6O75951 148 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 BRWD1-AS2P59051 145 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 AESQ08117 197 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 SLC10A1Q14973 349 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 ADIRFQ15847 76 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 CLEC12BQ2HXU8 276 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 TBC1D28Q2M2D7 210 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 MOB1BQ7L9L4 216 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 MRGPRGQ86SM5 289 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 TPRX1Q8N7U7 411 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 SLC25A40Q8TBP6 338 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 RPUSD4Q96CM3 377 aaKnown RBP10.94□□□□□ -0.66
PTPN7-217ENST00000495688 SNX22Q96L94 193 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 DDA1Q9BW61 102 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 SLC39A9Q9NUM3 307 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 TREM2Q9NZC2 230 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 DMXL1Q9Y485 3027 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 SEC14L6B5MCN3 397 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 C12orf77C9JDV5 145 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 FABP4P15090 132 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 RND2P52198 227 aa10.94□□□□□ -0.66
PTPN7-217ENST00000495688 PNRC1Q12796 327 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms