RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 FAM71F2Q6NXP2 309 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 TGIF2LXQ8IUE1 241 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 H1FOOQ8IZA3 346 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-235ENST00000495515 ST6GALNAC6Q969X2 333 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 DUX5Q96PT3 197 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 ABHD1Q96SE0 405 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 IFI27L2Q9H2X8 130 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 TNFRSF19Q9NS68 423 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 ZNF221Q9UK13 617 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 VPREB3Q9UKI3 123 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 GABARAPH6UMI1 98 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 CTDSPLO15194 276 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 FCER2P06734 321 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 PAX6P26367 422 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 CDK10Q15131 360 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 C16orf87Q6PH81 154 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 FAM131AQ6UXB0 335 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 LIAT1Q6ZQX7 453 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 OR5H2Q8NGV7 314 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 RTN4IP1Q8WWV3 396 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-235ENST00000495515 SNAPC3Q92966 411 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 AGMATQ9BSE5 352 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 RAB18Q9NP72 206 aa13.79□□□□□ -0.2
HDAC6-235ENST00000495515 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 OR8U9P0C7N5 309 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-235ENST00000495515 OR5H8P0DN80 308 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 GPR12P47775 334 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 REG1BP48304 166 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 RPL15P61313 204 aaKnown RBP13.78□□□□□ -0.2
HDAC6-235ENST00000495515 SSBP1Q04837 148 aaKnown RBP13.78□□□□□ -0.2
HDAC6-235ENST00000495515 SPANXN2Q5MJ10 180 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 MOB3BQ86TA1 216 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 OR8U1Q8NH10 309 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 OR52I2Q8NH67 350 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 CHIAQ9BZP6 476 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 PARP12Q9H0J9 701 aaKnown RBP13.78□□□□□ -0.2
HDAC6-235ENST00000495515 OR2W1Q9Y3N9 320 aa13.78□□□□□ -0.2
HDAC6-235ENST00000495515 IGHV1-3A0A0C4DH29 117 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 A0A1W2PPI3 338 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 TIMM23O14925 209 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 SLC22A5O76082 557 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 CRYBA1P05813 215 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 NFYAP23511 347 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-235ENST00000495515 PTBP1P26599 531 aaKnown RBP eCLIP13.77□□□□□ -0.21
HDAC6-235ENST00000495515 HLA-DMAP28067 261 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 RAB13P51153 203 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 LUMP51884 338 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-235ENST00000495515 DIAPH2-AS1Q14236 149 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 ACTBL2Q562R1 376 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 THNSL2Q86YJ6 484 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 ODF3L1Q8IXM7 274 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 DRAM1Q8N682 238 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-235ENST00000495515 OR6Q1Q8NGQ2 317 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 SMIM4Q8WVI0 70 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 ABHD14BQ96IU4 210 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 EHFQ9NZC4 300 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 MTFP1Q9UDX5 166 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 RNF150Q9ULK6 438 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 TCF19Q9Y242 345 aa13.77□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-235ENST00000495515 FCGR2CP31995 323 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 LY6EQ16553 131 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 CCDC190Q86UF4 302 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 OR56B4Q8NH76 319 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 TMEM158Q8WZ71 300 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 AKR1E2Q96JD6 320 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 SOSTQ9BQB4 213 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 OR2D2Q9H210 308 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 TAS2R8Q9NYW2 309 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 KLK11Q9UBX7 282 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF107Q9UII5 783 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-235ENST00000495515 GAB2Q9UQC2 676 aa13.76□□□□□ -0.21
HDAC6-235ENST00000495515 GSTZ1O43708 216 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-235ENST00000495515 GPR137BO60478 399 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 TUSC2O75896 110 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 PMP2P02689 132 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 TBPP20226 339 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 CD1BP29016 333 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 HRH1P35367 487 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 ETV6P41212 452 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 DGCR2P98153 550 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 DYRK1AQ13627 763 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-235ENST00000495515 CNPY1Q3B7I2 92 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 LYSMD2Q8IV50 215 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 GIMAP1Q8WWP7 306 aa13.75□□□□□ -0.21
HDAC6-235ENST00000495515 A6NDX4 124 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 FAM90A9PA6NNJ1 464 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 IFNA6P05013 189 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 CSF1P09603 554 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 RFX2P48378 723 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 TAS2R19P59542 299 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms