RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CT45A5P0DMU8 189 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 CT45A7P0DMV0 189 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 T-ENOLP0DO92 83 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 RPA2P15927 270 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 RIDAP52758 137 aaKnown RBP6.23□□□□□ -1.41
GARNL3-219ENST00000495172 IFFO1Q0D2I5 559 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 CYLC2Q14093 348 aaPredicted RBP6.23□□□□□ -1.41
GARNL3-219ENST00000495172 ODF1Q14990 250 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 WHAMMP3Q1A5X7 153 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 ZNF829Q3KNS6 432 aaPredicted RBP6.23□□□□□ -1.41
GARNL3-219ENST00000495172 CLEC19AQ6UXS0 136 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 DRAXINQ8NBI3 349 aaPredicted RBP6.23□□□□□ -1.41
GARNL3-219ENST00000495172 SETD9Q8NE22 299 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 MRPS24Q96EL2 167 aaKnown RBP6.23□□□□□ -1.41
GARNL3-219ENST00000495172 ATG101Q9BSB4 218 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 BTBD10Q9BSF8 475 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 ABHD14AQ9BUJ0 271 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 DPCDQ9BVM2 203 aaPredicted RBP6.23□□□□□ -1.41
GARNL3-219ENST00000495172 MROQ9BYG7 248 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 IL20Q9NYY1 176 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 PTTG2Q9NZH5 202 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 SNX5Q9Y5X3 404 aa6.23□□□□□ -1.41
GARNL3-219ENST00000495172 H0YJW9 148 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 TSPAN4O14817 238 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 SLC22A1O15245 554 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 SYT7O43581 403 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 GATBO75879 557 aaKnown RBP6.22□□□□□ -1.41
GARNL3-219ENST00000495172 TUSC2O75896 110 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 RPP14O95059 124 aaKnown RBP6.22□□□□□ -1.41
GARNL3-219ENST00000495172 IGKV1-16P04430 117 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 MIFP14174 115 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 ZNF3P17036 446 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 GZMHP20718 246 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 C4BPBP20851 252 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 CCL1P22362 96 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 ARL3P36405 182 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 EMP1P54849 157 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 PPP1R8Q12972 351 aaKnown RBP6.22□□□□□ -1.41
GARNL3-219ENST00000495172 ALKBH1Q13686 389 aaKnown RBP6.22□□□□□ -1.41
GARNL3-219ENST00000495172 C15orf32Q32M92 178 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 MORN2Q502X0 79 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 LEMD1Q68G75 181 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 GPHB5Q86YW7 130 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 OR8J3Q8NGG0 315 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 RP9Q8TA86 221 aaKnown RBP6.22□□□□□ -1.41
GARNL3-219ENST00000495172 TMEM163Q8TC26 289 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 GHSRQ92847 366 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 Q9N2K0 584 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 CMTM6Q9NX76 183 aa6.22□□□□□ -1.41
GARNL3-219ENST00000495172 TMEM30CPA0ZSE6 113 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 ZNF207O43670 478 aaKnown RBP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 GASTP01350 101 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 CTSDP07339 412 aaPredicted RBP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 ATF1P18846 271 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 BTF3P20290 206 aaKnown RBP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 SF3A3Q12874 501 aaKnown RBP eCLIP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 FDX2Q6P4F2 183 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 SERPINA12Q8IW75 414 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 ZNF679Q8IYX0 411 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 OR4K15Q8NH41 348 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 PHB2Q99623 299 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 C6orf62Q9GZU0 229 aaPredicted RBP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 C5orf66Q9H5L9 145 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 CMC2Q9NRP2 79 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 FAM30AQ9NZY2 134 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 RCC2Q9P258 522 aaKnown RBP6.21□□□□□ -1.42
GARNL3-219ENST00000495172 R4GMQ9 66 aa6.21□□□□□ -1.42
GARNL3-219ENST00000495172 TRBV9A0A0B4J1U6 114 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 C15orf61A6NNL5 157 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 DHRS7CA6NNS2 312 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 OXTP01178 125 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 IFNGP01579 166 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 MT-ND4P03905 459 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 OR9G9P0C7N8 305 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 P0C879 139 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 TMEM225BP0DP42 221 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 RCC1P18754 421 aaPredicted RBP6.2□□□□□ -1.42
GARNL3-219ENST00000495172 CRISP1P54107 249 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 RPS7P62081 194 aaKnown RBP6.2□□□□□ -1.42
GARNL3-219ENST00000495172 ROM1Q03395 351 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 SAMD4BQ5PRF9 694 aaKnown RBP6.2□□□□□ -1.42
GARNL3-219ENST00000495172 LPCAT4Q643R3 524 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 GBGT1Q8N5D6 347 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 OR2T33Q8NG76 320 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 FGGYQ96C11 551 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 OPALINQ96PE5 141 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 CCDC28BQ9BUN5 200 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 IFI27L2Q9H2X8 130 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 OR2S2Q9NQN1 319 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 SAMD4AQ9UPU9 718 aaKnown RBP6.2□□□□□ -1.42
GARNL3-219ENST00000495172 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
GARNL3-219ENST00000495172 LOC107986453A0A1B0GWG9 222 aa6.19□□□□□ -1.42
GARNL3-219ENST00000495172 OR4C46A6NHA9 309 aa6.19□□□□□ -1.42
GARNL3-219ENST00000495172 FAM90A7PA6NKC0 464 aa6.19□□□□□ -1.42
GARNL3-219ENST00000495172 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
GARNL3-219ENST00000495172 AIPO00170 330 aa6.19□□□□□ -1.42
GARNL3-219ENST00000495172 GSTA4O15217 222 aa6.19□□□□□ -1.42
GARNL3-219ENST00000495172 SULT1B1O43704 296 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms