RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SLURP1P55000 103 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 RPS27AP62979 156 aaKnown RBP17.08■□□□□ 0.32
HDDC3-203ENST00000494993 INSL4Q14641 139 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 SVOPQ8N4V2 548 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 TCTEX1D1Q8N7M0 179 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 NANOGP1Q8N7R0 232 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 TOLLIPQ9H0E2 274 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 FOXA2Q9Y261 457 aaPredicted RBP17.08■□□□□ 0.32
HDDC3-203ENST00000494993 LINC01619G3V211 115 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 RRHO14718 337 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 NAPSAO96009 420 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 LGALS1P09382 135 aaKnown RBP17.07■□□□□ 0.32
HDDC3-203ENST00000494993 CX3CL1P78423 397 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-203ENST00000494993 ACSM3Q53FZ2 586 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 RPL39P5Q59GN2 51 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 C1orf100Q5SVJ3 147 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 GLT8D1Q68CQ7 371 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 ZNF880Q6PDB4 577 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 LRRTM1Q86UE6 522 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 SBSPONQ8IVN8 264 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 C8orf59Q8N0T1 100 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-203ENST00000494993 TPSG1Q9NRR2 321 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 PLCXD1Q9NUJ7 323 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 SLC23A1Q9UHI7 598 aa17.07■□□□□ 0.32
HDDC3-203ENST00000494993 OR5H14A6NHG9 310 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 GNAO1P09471 354 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 CT45A6P0DMU7 189 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 CT45A5P0DMU8 189 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 CT45A7P0DMV0 189 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 SPNP16150 400 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 HTR2CP28335 458 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 PLGLAQ15195 96 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 GLDNQ6ZMI3 551 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-203ENST00000494993 CASTOR1Q8WTX7 329 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 FBLIM1Q8WUP2 373 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 NICN1Q9BSH3 213 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 TM2D1Q9BX74 207 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 KCNK15Q9H427 330 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 CHMP1AQ9HD42 196 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-203ENST00000494993 NUBP2Q9Y5Y2 271 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 A3GALT2U3KPV4 340 aa17.06■□□□□ 0.32
HDDC3-203ENST00000494993 DYNC2H1Q8NCM8 4307 aaKnown RBP17.06■□□□□ 0.32
HDDC3-203ENST00000494993 IGHV4OR15-8A0A075B7B6 117 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 A0A087WW49 117 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 H0YJW9 148 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 EBAG9O00559 213 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 EGR2P11161 476 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-203ENST00000494993 MC5RP33032 325 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 UNC119Q13432 240 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 RBM48Q5RL73 367 aaKnown RBP17.05■□□□□ 0.32
HDDC3-203ENST00000494993 CD200R1LQ6Q8B3 271 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 MOB1BQ7L9L4 216 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 MS4A15Q8N5U1 240 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 BPIFB6Q8NFQ5 453 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 KCNG3Q8TAE7 436 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 SETD6Q8TBK2 473 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 ABHD5Q8WTS1 349 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 RCHY1Q96PM5 261 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 PARP12Q9H0J9 701 aaKnown RBP17.05■□□□□ 0.32
HDDC3-203ENST00000494993 FKBP14Q9NWM8 211 aa17.05■□□□□ 0.32
HDDC3-203ENST00000494993 FCN1O00602 326 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 ITGB1BP1O14713 200 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 RBBP9O75884 186 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 GSTP1P09211 210 aaKnown RBP17.04■□□□□ 0.32
HDDC3-203ENST00000494993 GP9P14770 177 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 TMEM267Q0VDI3 215 aaPredicted RBP17.04■□□□□ 0.32
HDDC3-203ENST00000494993 PYHIN1Q6K0P9 492 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 ACSM6Q6P461 480 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 OVCH2Q7RTZ1 564 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 OR6Q1Q8NGQ2 317 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 MUC7Q8TAX7 377 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 PHYHIPQ92561 330 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 ARPC1AQ92747 370 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 ABHD14BQ96IU4 210 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 GHITMQ9H3K2 345 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 RNF150Q9ULK6 438 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 WASHC3Q9Y3C0 194 aa17.04■□□□□ 0.32
HDDC3-203ENST00000494993 TMEM14DPA8MWL7 114 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 H7C2Y5 167 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 PPP1R27Q86WC6 154 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 OR5AN1Q8NGI8 311 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 AGMATQ9BSE5 352 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 PLEKHJ1Q9NW61 149 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 GAB2Q9UQC2 676 aa17.03■□□□□ 0.32
HDDC3-203ENST00000494993 A0A0A6YYD4 124 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 TRBV6-6A0A0A6YYG2 114 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 SLC22A1O15245 554 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 OR8U9P0C7N5 309 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 FRMD6-AS1P0C7T7 363 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 QRFPP83859 136 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 AKIRIN2Q53H80 203 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 ACTBL2Q562R1 376 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 UNQ5815/PRO19632Q6UWF5 114 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 RNF5Q99942 180 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 FAM103A1Q9BTL3 118 aaKnown RBP17.02■□□□□ 0.32
HDDC3-203ENST00000494993 TMED9Q9BVK6 235 aa17.02■□□□□ 0.32
HDDC3-203ENST00000494993 RIMS4Q9H426 269 aaPredicted RBP17.02■□□□□ 0.32
HDDC3-203ENST00000494993 BPNT1O95861 308 aa17.01■□□□□ 0.31
HDDC3-203ENST00000494993 IGHV3-11P01762 117 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms