RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	AADACL3	Q5VUY0	350 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	PLET1	Q6UQ28	207 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	PNKD	Q8N490	385 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	OR8U1	Q8NH10	309 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	TOMM40L	Q969M1	308 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	TMPRSS13	Q9BYE2	586 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	FXYD6	Q9H0Q3	95 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	OR2D2	Q9H210	308 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	NUBP2	Q9Y5Y2	271 aa		11.06	□□□□□ -0.64
APTX-231	ENST00000494973	OR5H14	A6NHG9	310 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	ODF3B	A8MYP8	253 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	LEUTX	A8MZ59	168 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	GPR31	O00270	319 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	B3GALNT1	O75752	331 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	IGLV1-47	P01700	117 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	ARG1	P05089	322 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CTSD	P07339	412 aa	Predicted RBP	11.05	□□□□□ -0.64
APTX-231	ENST00000494973	EPHA1	P21709	976 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	BTC	P35070	178 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	UBE2M	P61081	183 aa	Known RBP	11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CATR1	Q13166	79 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CT45A1	Q5HYN5	189 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CCDC144NL	Q6NUI1	221 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	LYG1	Q8N1E2	194 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CIART	Q8N365	385 aa	Predicted RBP	11.05	□□□□□ -0.64
APTX-231	ENST00000494973	DUSP18	Q8NEJ0	188 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	OR13C8	Q8NGS7	320 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CT45A3	Q8NHU0	189 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	NANP	Q8TBE9	248 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	SECTM1	Q8WVN6	248 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	LHX4	Q969G2	390 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	ADTRP	Q96IZ2	230 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	IFI27L2	Q9H2X8	130 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	CSMD2	Q7Z408	3487 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	ABCA1	O95477	2261 aa		11.05	□□□□□ -0.64
APTX-231	ENST00000494973	FLNA	P21333	2647 aa	Known RBP	11.05	□□□□□ -0.64
APTX-231	ENST00000494973	ARHGAP32	A7KAX9	2087 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	TRAV40	A0A0B4J280	105 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	IGHV1-69D	A0A0B4J2H0	117 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	RNASEK-C17orf49	H0YIS7	233 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	ST8SIA5	O15466	376 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	IGHV1-69	P01742	117 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	TCRB	P04435	133 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	CD99	P14209	185 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	RAG2	P55895	527 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	RND3	P61587	244 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	TAGLN	Q01995	201 aa	Known RBP	11.04	□□□□□ -0.64
APTX-231	ENST00000494973	TRIM16L	Q309B1	348 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	CENPS	Q8N2Z9	138 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	BVES	Q8NE79	360 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	LEAP2	Q969E1	77 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	RPE	Q96AT9	228 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	HSD17B10	Q99714	261 aa	Known RBP	11.04	□□□□□ -0.64
APTX-231	ENST00000494973	AGMAT	Q9BSE5	352 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	RSRP1	Q9BUV0	290 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	C20orf85	Q9H1P6	137 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	TMEM160	Q9NX00	188 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	DPM3	Q9P2X0	92 aa		11.04	□□□□□ -0.64
APTX-231	ENST00000494973	BUB1B-PAK6	H3BSN5	160 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	NPFF	O15130	113 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	CCR6	P51684	374 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	ZNF66	Q6ZN08	573 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	C5orf24	Q7Z6I8	188 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	NRARP	Q7Z6K4	114 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	TCTEX1D1	Q8N7M0	179 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	OR4P4	Q8NGL7	312 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	MARCH1	Q8TCQ1	289 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	TMUB1	Q9BVT8	246 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	GPR132	Q9UNW8	380 aa		11.03	□□□□□ -0.64
APTX-231	ENST00000494973	SAA2-SAA4	A0A096LPE2	208 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	IGKV1D-13	A0A0B4J2D9	117 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	CENPVL3	A0A0U1RRI6	287 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973		A8MV72	311 aa	Predicted RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	HSD17B6	O14756	317 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	PRAF2	O60831	178 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	GAPDH	P04406	335 aa	Known RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	RLN1	P04808	185 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	SAA2	P0DJI9	122 aa	Predicted RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	IGKV1-13	P0DP09	117 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	ANXA3	P12429	323 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	GNRHR	P30968	328 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	KIR2DS2	P43631	304 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	THBS3	P49746	956 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	ZNF134	P52741	427 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	CBX3	Q13185	183 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	KLRD1	Q13241	179 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	HCP5	Q6MZN7	132 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	ZNF833P	Q6ZTB9	187 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	KCTD9	Q7L273	389 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	TGIF2LX	Q8IUE1	241 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	OR8H3	Q8N146	312 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	DRAM1	Q8N682	238 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	MALSU1	Q96EH3	234 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	PARP12	Q9H0J9	701 aa	Known RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	ALX4	Q9H161	411 aa	Predicted RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	SLC2A9	Q9NRM0	540 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	LIN7C	Q9NUP9	197 aa	Known RBP	11.02	□□□□□ -0.65
APTX-231	ENST00000494973	NUDT15	Q9NV35	164 aa		11.02	□□□□□ -0.65
APTX-231	ENST00000494973	PRELID3B	Q9Y3B1	194 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms