RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SVOPQ8N4V2 548 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 KCNG3Q8TAE7 436 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 PHYHIPQ92561 330 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 SLC23A1Q9UHI7 598 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 FOXA2Q9Y261 457 aaPredicted RBP17.99■□□□□ 0.47
COL27A1-208ENST00000494780 FBXO7Q9Y3I1 522 aa17.99■□□□□ 0.47
COL27A1-208ENST00000494780 A0A1W2PN81 502 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 OR5H14A6NHG9 310 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 LINC01619G3V211 115 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 SOX15O60248 233 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 SAP30O75446 220 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 NAPSAO96009 420 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 CT45A6P0DMU7 189 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 CT45A5P0DMU8 189 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 CT45A7P0DMV0 189 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 MC5RP33032 325 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 CHRNA7P36544 502 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 CX3CL1P78423 397 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 ZNF880Q6PDB4 577 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 LRRTM1Q86UE6 522 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 MS4A15Q8N5U1 240 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 FBLIM1Q8WUP2 373 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 DLX4Q92988 240 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-208ENST00000494780 TM2D1Q9BX74 207 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 TOLLIPQ9H0E2 274 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 ALX4Q9H161 411 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-208ENST00000494780 GHITMQ9H3K2 345 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 FBXL15Q9H469 300 aa17.98■□□□□ 0.47
COL27A1-208ENST00000494780 CHMP1AQ9HD42 196 aaPredicted RBP17.98■□□□□ 0.47
COL27A1-208ENST00000494780 LGALS1P09382 135 aaKnown RBP17.97■□□□□ 0.47
COL27A1-208ENST00000494780 GNAO1P09471 354 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 HTR2CP28335 458 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 TMEM267Q0VDI3 215 aaPredicted RBP17.97■□□□□ 0.47
COL27A1-208ENST00000494780 INSL4Q14641 139 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 PLGLAQ15195 96 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 RPL39P5Q59GN2 51 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 MOB1BQ7L9L4 216 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 BPIFB6Q8NFQ5 453 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 FKBP14Q9NWM8 211 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 NUBP2Q9Y5Y2 271 aa17.97■□□□□ 0.47
COL27A1-208ENST00000494780 ITGB1BP1O14713 200 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 RBBP9O75884 186 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 SLURP1P55000 103 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 GABPB1Q06547 395 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-208ENST00000494780 RBM48Q5RL73 367 aaKnown RBP17.96■□□□□ 0.47
COL27A1-208ENST00000494780 PYHIN1Q6K0P9 492 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 CD200R1LQ6Q8B3 271 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 RNF5Q99942 180 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 NICN1Q9BSH3 213 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 RIMS4Q9H426 269 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-208ENST00000494780 TPSG1Q9NRR2 321 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 RNF150Q9ULK6 438 aa17.96■□□□□ 0.47
COL27A1-208ENST00000494780 H0YJW9 148 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 GSTP1P09211 210 aaKnown RBP17.95■□□□□ 0.46
COL27A1-208ENST00000494780 EGR2P11161 476 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-208ENST00000494780 UNC119Q13432 240 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 GLDNQ6ZMI3 551 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-208ENST00000494780 SBSPONQ8IVN8 264 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 OR5AN1Q8NGI8 311 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 SETD6Q8TBK2 473 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 ABHD5Q8WTS1 349 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 PLEKHJ1Q9NW61 149 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 WASHC3Q9Y3C0 194 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 A3GALT2U3KPV4 340 aa17.95■□□□□ 0.46
COL27A1-208ENST00000494780 IGHV4OR15-8A0A075B7B6 117 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 A0A087WW49 117 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 TRBV6-6A0A0A6YYG2 114 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 TMEM14DPA8MWL7 114 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 FCN1O00602 326 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 SLC22A1O15245 554 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 CD37P11049 281 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 SPNP16150 400 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 QRFPP83859 136 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 RNLSQ5VYX0 342 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 ACSM6Q6P461 480 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 OR6Q1Q8NGQ2 317 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 CASTOR1Q8WTX7 329 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 ABHD14BQ96IU4 210 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 AGMATQ9BSE5 352 aa17.94■□□□□ 0.46
COL27A1-208ENST00000494780 H7C2Y5 167 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 BPNT1O95861 308 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 OR8U9P0C7N5 309 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 GP9P14770 177 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 SRMP19623 302 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 AKIRIN2Q53H80 203 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 ACTBL2Q562R1 376 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 PPP1R27Q86WC6 154 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 MUC7Q8TAX7 377 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 EDARADDQ8WWZ3 215 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 RCHY1Q96PM5 261 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 TMED9Q9BVK6 235 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 MND1Q9BWT6 205 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 PARP12Q9H0J9 701 aaKnown RBP17.93■□□□□ 0.46
COL27A1-208ENST00000494780 KCNK15Q9H427 330 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 MGAT4AQ9UM21 535 aa17.93■□□□□ 0.46
COL27A1-208ENST00000494780 ZBTB25P24278 435 aa17.92■□□□□ 0.46
COL27A1-208ENST00000494780 RCN1Q15293 331 aa17.92■□□□□ 0.46
COL27A1-208ENST00000494780 HSD17B12Q53GQ0 312 aa17.92■□□□□ 0.46
COL27A1-208ENST00000494780 UNQ5815/PRO19632Q6UWF5 114 aa17.92■□□□□ 0.46
COL27A1-208ENST00000494780 ZNF562Q6V9R5 426 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms