RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 HERPUD1Q15011 391 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 IZUMO1Q8IYV9 350 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 DRAM1Q8N682 238 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 Q8N6K4 173 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 OR4C13Q8NGP0 309 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 OR5H6Q8NGV6 325 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 OR56B4Q8NH76 319 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 RTN4IP1Q8WWV3 396 aaPredicted RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 RBM14Q96PK6 669 aaKnown RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 CABLES2Q9BTV7 478 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 NPFFR1Q9GZQ6 430 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 TOLLIPQ9H0E2 274 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 PARP12Q9H0J9 701 aaKnown RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 CHMP1AQ9HD42 196 aaPredicted RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 OR2S2Q9NQN1 319 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 RHBDL2Q9NX52 303 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 ELF5Q9UKW6 265 aaPredicted RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 MGAT4AQ9UM21 535 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 SIGLEC9Q9Y336 463 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 SCO2A0A1W2PP80 73 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 METTL21EPA6NDL7 271 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 SERPINE3A8MV23 424 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ITGB1BP1O14713 200 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 LANCL1O43813 399 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 TFAP2AP05549 437 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 SCTP09683 121 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 RPS19P39019 145 aaKnown RBP6.98□□□□□ -1.29
ITGB1-217ENST00000494395 REG1BP48304 166 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 NCS1P62166 190 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 LSM3P62310 102 aaKnown RBP6.98□□□□□ -1.29
ITGB1-217ENST00000494395 BLCAPP62952 87 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 SRSF7Q16629 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ZNF260Q3ZCT1 412 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 Q6ZS49 121 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 CLRN3Q8NCR9 226 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ZNF251Q9BRH9 671 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 AGMATQ9BSE5 352 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 SLC25A33Q9BSK2 321 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ABHD14AQ9BUJ0 271 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 MRPS26Q9BYN8 205 aaKnown RBP6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ATG5Q9H1Y0 275 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 IFI27L2Q9H2X8 130 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ABRACLQ9P1F3 81 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 OR1A1Q9P1Q5 309 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 SPATA2Q9UM82 520 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 ETV7Q9Y603 341 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 TRRAPQ9Y4A5 3859 aa6.98□□□□□ -1.29
ITGB1-217ENST00000494395 IGKV1D-8A0A087WSZ0 117 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 IGHV3-72A0A0B4J1Y9 119 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 TRDCB7Z8K6 153 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 TXNL1O43396 289 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 PROP1O75360 226 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 SCGNO76038 276 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 RGS11O94810 467 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 GABARAPO95166 117 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 DIRAS3O95661 229 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 CD3GP09693 182 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 DTYMKP23919 212 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 IL3RAP26951 378 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 CD1BP29016 333 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 CTF1Q16619 201 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 CDNFQ49AH0 187 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 IDNKQ5T6J7 187 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 ZNF833PQ6ZTB9 187 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 ANKRD13BQ86YJ7 626 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 OR4A4PQ8NGN8 299 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 OR2T6Q8NHC8 308 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 SETD6Q8TBK2 473 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 IL1F10Q8WWZ1 152 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 PRSS22Q9GZN4 317 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 NAA50Q9GZZ1 169 aaKnown RBP6.97□□□□□ -1.29
ITGB1-217ENST00000494395 SLC23A1Q9UHI7 598 aa6.97□□□□□ -1.29
ITGB1-217ENST00000494395 A0A075B6Q4 140 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 SAA2-SAA4A0A096LPE2 208 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 TRBV6-7A0A0A0MS04 114 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 TMEM235A6NFC5 223 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 ZNF736B4DX44 427 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-217ENST00000494395 FABP7O15540 132 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 FGF16O43320 207 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 SSX5O60225 188 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 IGKV1D-33P01593 117 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 IGKV1-33P01594 117 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 GSTT2P0CG29 244 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 GSTT2BP0CG30 244 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 FAM106CPP0CH98 169 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 SAA2P0DJI9 122 aaPredicted RBP6.96□□□□□ -1.3
ITGB1-217ENST00000494395 OR3A3P47888 321 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 VBP1P61758 197 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 ARL6IP1Q15041 203 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 TMEM95Q3KNT9 176 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 HACD4Q5VWC8 232 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 FAM71F2Q6NXP2 309 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 C11orf88Q6PI97 169 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 MOB3BQ86TA1 216 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 TGIF2LXQ8IUE1 241 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 CROCCP3Q8IVE0 287 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 LYG1Q8N1E2 194 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 KLHDC1Q8N7A1 406 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 C5orf56Q8N8D9 126 aa6.96□□□□□ -1.3
ITGB1-217ENST00000494395 OR2AK2Q8NG84 335 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms