RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 IGKV1D-33P01593 117 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 IGKV1-33P01594 117 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 GAPDHP04406 335 aaKnown RBP6.4□□□□□ -1.38
RIF1-211ENST00000494333 TMEM11P17152 192 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 FUT3P21217 361 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 REG1BP48304 166 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 AQP4P55087 323 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 GPR50Q13585 617 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 MED22Q15528 200 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 FAM27D1Q5T7N8 215 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 RNLSQ5VYX0 342 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 FAM53AQ6NSI3 398 aaPredicted RBP6.4□□□□□ -1.38
RIF1-211ENST00000494333 UNQ9370/PRO34162Q6UXP9 181 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 MOB3BQ86TA1 216 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 LYPD6Q86Y78 171 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 OR8H3Q8N146 312 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 NKAIN3Q8N8D7 197 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 SGCDQ92629 289 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 FAM46BQ96A09 425 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 UQCC2Q9BRT2 126 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 TMED9Q9BVK6 235 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 RCC2Q9P258 522 aaKnown RBP6.4□□□□□ -1.38
RIF1-211ENST00000494333 TPRKBQ9Y3C4 175 aa6.4□□□□□ -1.38
RIF1-211ENST00000494333 PKD1L1Q8TDX9 2849 aa6.4□□□□□ -1.39
RIF1-211ENST00000494333 TET2Q6N021 2002 aaPredicted RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 IGHV3-72A0A0B4J1Y9 119 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 IGHV1-3A0A0C4DH29 117 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 FAM90A10PA6NDY2 464 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 FAM90A7PA6NKC0 464 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 FAM90A23PA8MXZ1 464 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 C12orf77C9JDV5 145 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 HSD17B6O14756 317 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 SPINT2O43291 252 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 RCC1P18754 421 aaPredicted RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 SRMP19623 302 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 ZNF816Q0VGE8 651 aaPredicted RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 TCTEX1D4Q5JR98 221 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 C6orf183Q5T699 404 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 GLT8D1Q68CQ7 371 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 SIGIRRQ6IA17 410 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 OR10K2Q6IF99 312 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 C10orf99Q6UWK7 81 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 CEACAM19Q7Z692 300 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 LRRTM1Q86UE6 522 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 LINC00311Q8N616 119 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 OR4X2Q8NGF9 303 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 TMEM203Q969S6 136 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 FYTTD1Q96QD9 318 aaKnown RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 CST11Q9H112 138 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 RAB9BQ9NP90 201 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 GAR1Q9NY12 217 aaKnown RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 GNG12Q9UBI6 72 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 GHRLQ9UBU3 117 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 LSM2Q9Y333 95 aaKnown RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 MOB4Q9Y3A3 225 aa6.39□□□□□ -1.39
RIF1-211ENST00000494333 TSSC4Q9Y5U2 329 aaPredicted RBP6.39□□□□□ -1.39
RIF1-211ENST00000494333 NCBP2LA6PVI3 153 aaKnown RBP6.38□□□□□ -1.39
RIF1-211ENST00000494333 SLC31A2O15432 143 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 CA11O75493 328 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 SC5DO75845 299 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 HBZP02008 142 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
RIF1-211ENST00000494333 PRB2P02812 416 aaPredicted RBP6.38□□□□□ -1.39
RIF1-211ENST00000494333 GLAP06280 429 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 UBBP0CG47 229 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 HSMCR30P0CW71 290 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 IL3RAP26951 378 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 SLC35A2P78381 396 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 EBI3Q14213 229 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 Q3ZCU0 254 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 HSD17B12Q53GQ0 312 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 CT45A1Q5HYN5 189 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 RBM48Q5RL73 367 aaKnown RBP6.38□□□□□ -1.39
RIF1-211ENST00000494333 C1orf100Q5SVJ3 147 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 LIPKQ5VXJ0 399 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 TMEM65Q6PI78 240 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 SLC25A48Q6ZT89 311 aaKnown RBP6.38□□□□□ -1.39
RIF1-211ENST00000494333 C5orf24Q7Z6I8 188 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 ZNF329Q86UD4 541 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 GAPTQ8N292 157 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 C5orf56Q8N8D9 126 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 C8orf31Q8N9H6 132 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 OR1L1Q8NH94 360 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 CT45A3Q8NHU0 189 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 PHYHIPQ92561 330 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 CYYR1Q96J86 154 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 NOL4LQ96MY1 436 aaPredicted RBP6.38□□□□□ -1.39
RIF1-211ENST00000494333 NEDD4LQ96PU5 975 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 CCDC90BQ9GZT6 254 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 DUSP21Q9H596 190 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 TAF9BQ9HBM6 251 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 OR2S2Q9NQN1 319 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 KCNIP1Q9NZI2 227 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 LINC00527Q9UJ94 153 aa6.38□□□□□ -1.39
RIF1-211ENST00000494333 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
RIF1-211ENST00000494333 PSMB11A5LHX3 300 aa6.37□□□□□ -1.39
RIF1-211ENST00000494333 SERPINE3A8MV23 424 aa6.37□□□□□ -1.39
RIF1-211ENST00000494333 ZNF736B4DX44 427 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms