RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 AESQ08117 197 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF525Q8N782 197 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 OR1L1Q8NH94 360 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 CLCC1Q96S66 551 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 NCOR1P1Q9H4R4 102 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 SLC25A15Q9Y619 301 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 ESPL1Q14674 2120 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 FAM186AA6NE01 2351 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 FAM90A9PA6NNJ1 464 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 NDUFS6O75380 124 aaKnown RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 NXPH3O95157 252 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CLDN1O95832 211 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CRYAAP02489 173 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SRP19P09132 144 aaKnown RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 METTL15P1P0C7V9 234 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SPINK2P20155 84 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 MAS1LP35410 378 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 RPS23P62266 143 aaKnown RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 RUNX1Q01196 453 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 COL10A1Q03692 680 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 TMEM267Q0VDI3 215 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 EIF4EBP1Q13541 118 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 AKIRIN2Q53H80 203 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 TMEM14EPQ6UXP3 125 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 LINC00518Q8N0U6 118 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF295-AS1Q8N0V1 137 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CLDND2Q8NHS1 167 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 LRRC29Q8WV35 223 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 HIST1H2BAQ96A08 127 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 MUCL1Q96DR8 90 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 MALSU1Q96EH3 234 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 COQ2Q96H96 371 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SNX22Q96L94 193 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 P2RX4Q99571 388 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 NIPSNAP3BQ9BS92 247 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 MRPL37Q9BZE1 423 aaKnown RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SIRT7Q9NRC8 400 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 DKK4Q9UBT3 224 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CFAP54Q96N23 3096 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 DOCK7Q96N67 2140 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 VPS13AQ96RL7 3174 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 FRYLO94915 3013 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 BDP1A6H8Y1 2624 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CXorf65A6NEN9 183 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 LRRC30A6NM36 301 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 H3BP45 60 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 MGST3O14880 152 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 IGHV3-13P01766 116 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 P0C879 139 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 IAPPP10997 89 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 PRDX2P32119 198 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SELENOVP59797 346 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CCL20P78556 96 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SLC38A11Q08AI6 406 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 PNRC1Q12796 327 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 FOXF2Q12947 444 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 TMEM41BQ5BJD5 291 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SPANXN5Q5MJ07 72 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 PRAMEF6Q5VXH4 476 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 RBMS3Q6XE24 437 aaKnown RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 Q6ZR03 302 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF826PQ6ZT77 177 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 SLC35E3Q7Z769 313 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CENPVQ7Z7K6 275 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 MRGPRDQ8TDS7 321 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 TCTEX1D2Q8WW35 142 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 TVP23CQ96ET8 276 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 RARRES2Q99969 163 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 WDR61Q9GZS3 305 aaKnown RBP8.09□□□□□ -1.11
NPHP3-209ENST00000493732 JPT1Q9UK76 154 aa8.09□□□□□ -1.11
NPHP3-209ENST00000493732 CACNA1GO43497 2377 aa8.09□□□□□ -1.12
NPHP3-209ENST00000493732 SRRM5B3KS81 715 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 WNT9BO14905 357 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 KRASP01116 189 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 S100A6P06703 90 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 RAB5AP20339 215 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 TIMP3P35625 211 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 GLRXP35754 106 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 CEBPDP49716 269 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-209ENST00000493732 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
NPHP3-209ENST00000493732 CTAG1AP78358 180 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 ICAM4Q14773 271 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 RTP5Q14D33 572 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 HAGHQ16775 308 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 CR1LQ2VPA4 569 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 KRTCAP3Q53RY4 240 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 ZNF429Q86V71 674 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 OR2Z1Q8NG97 314 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 OR10P1Q8NGE3 313 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 OR52L2PQ8NGH6 319 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 TAF15Q92804 592 aaKnown RBP eCLIP8.08□□□□□ -1.12
NPHP3-209ENST00000493732 ABHD14AQ9BUJ0 271 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 TMEM147Q9BVK8 224 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 OPN3Q9H1Y3 402 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-209ENST00000493732 RBKSQ9H477 322 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 MSL2Q9HCI7 577 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 UFSP2Q9NUQ7 469 aa8.08□□□□□ -1.12
NPHP3-209ENST00000493732 CISD1Q9NZ45 108 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms