RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SAA2-SAA4A0A096LPE2 208 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 ZNF701M0R085 212 aaPredicted RBP9.31□□□□□ -0.92
CTSA-209ENST00000493522 TIMM23O14925 209 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 TXNL1O43396 289 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 GAPDHP04406 335 aaKnown RBP9.31□□□□□ -0.92
CTSA-209ENST00000493522 SAA2P0DJI9 122 aaPredicted RBP9.31□□□□□ -0.92
CTSA-209ENST00000493522 MDKP21741 143 aaPredicted RBP9.31□□□□□ -0.92
CTSA-209ENST00000493522 CD24P25063 80 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 PRSS3P35030 304 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 CBX5P45973 191 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 DYNLT3P51808 116 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 ARPC4P59998 168 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 ZNF816Q0VGE8 651 aaPredicted RBP9.31□□□□□ -0.92
CTSA-209ENST00000493522 RNASE12Q5GAN4 147 aaKnown RBP9.31□□□□□ -0.92
CTSA-209ENST00000493522 LY6G6FQ5SQ64 297 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 CNIH2Q6PI25 160 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 MOB3BQ86TA1 216 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 TGIF2LXQ8IUE1 241 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 OR8H3Q8N146 312 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 DRAM1Q8N682 238 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 GVQW1Q8N7I0 195 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 BEST4Q8NFU0 473 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 MCFD2Q8NI22 146 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 MIXL1Q9H2W2 232 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 ANXA10Q9UJ72 324 aa9.31□□□□□ -0.92
CTSA-209ENST00000493522 TRBV6-7A0A0A0MS04 114 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 IGHV1-3A0A0C4DH29 117 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 A0A1B0GUS0 222 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 CTDSP2O14595 271 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 CHST1O43916 411 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 DIRAS3O95661 229 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 OR3A3P47888 321 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 ZNF137PP52743 207 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 HES1Q14469 280 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 HOGA1Q86XE5 327 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 PIFOQ8TCI5 191 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 RTN4IP1Q8WWV3 396 aaPredicted RBP9.3□□□□□ -0.92
CTSA-209ENST00000493522 TAF15Q92804 592 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTSA-209ENST00000493522 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 SLIRPQ9GZT3 109 aaKnown RBP9.3□□□□□ -0.92
CTSA-209ENST00000493522 C11orf54Q9H0W9 315 aaPredicted RBP9.3□□□□□ -0.92
CTSA-209ENST00000493522 RAB18Q9NP72 206 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 PIPOXQ9P0Z9 390 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 PITPNC1Q9UKF7 332 aa9.3□□□□□ -0.92
CTSA-209ENST00000493522 IGHV3-72A0A0B4J1Y9 119 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 DPPA5A6NC42 116 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 A6NDX4 124 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 ITGB1BP1O14713 200 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 LANCL1O43813 399 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 HLA-DQB1P01920 261 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 SNRNP70P08621 437 aaKnown RBP9.29□□□□□ -0.92
CTSA-209ENST00000493522 CTXN2P0C2S0 81 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 GPR12P47775 334 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 RAG2P55895 527 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 RPL15P61313 204 aaKnown RBP9.29□□□□□ -0.92
CTSA-209ENST00000493522 RPL39P5Q59GN2 51 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 ZNF833PQ6ZTB9 187 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 H1FOOQ8IZA3 346 aaPredicted RBP9.29□□□□□ -0.92
CTSA-209ENST00000493522 CFHR4Q92496 578 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 ST6GALNAC6Q969X2 333 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 DIRAS2Q96HU8 199 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 S1PR3Q99500 378 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 SLC25A33Q9BSK2 321 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 MRPL20Q9BYC9 149 aaKnown RBP9.29□□□□□ -0.92
CTSA-209ENST00000493522 OR2D2Q9H210 308 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 SCPEP1Q9HB40 452 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 NDUFA13Q9P0J0 144 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 ZNF221Q9UK13 617 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 RNF150Q9ULK6 438 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 RBM7Q9Y580 266 aaKnown RBP9.29□□□□□ -0.92
CTSA-209ENST00000493522 MMP24Q9Y5R2 645 aa9.29□□□□□ -0.92
CTSA-209ENST00000493522 RAB29O14966 203 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 IGKV1D-33P01593 117 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 IGKV1-33P01594 117 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 OR8U9P0C7N5 309 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 TMEM11P17152 192 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 NFYAP23511 347 aaPredicted RBP9.28□□□□□ -0.92
CTSA-209ENST00000493522 FBLN7Q53RD9 439 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 FAM71F2Q6NXP2 309 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 CCBE1Q6UXH8 406 aaPredicted RBP9.28□□□□□ -0.92
CTSA-209ENST00000493522 OR4C13Q8NGP0 309 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 OR8U1Q8NH10 309 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 GPX8Q8TED1 209 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 WFDC12Q8WWY7 111 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 SNAPC3Q92966 411 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 NPFFR1Q9GZQ6 430 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 BEX1Q9HBH7 125 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 NECAP2Q9NVZ3 263 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 C1RLQ9NZP8 487 aa9.28□□□□□ -0.92
CTSA-209ENST00000493522 J3QRK9 145 aa9.27□□□□□ -0.93
CTSA-209ENST00000493522 FAM106CPP0CH98 169 aa9.27□□□□□ -0.93
CTSA-209ENST00000493522 TAS2R46P59540 309 aa9.27□□□□□ -0.93
CTSA-209ENST00000493522 LSAMPQ13449 338 aa9.27□□□□□ -0.93
CTSA-209ENST00000493522 IL18Q14116 193 aa9.27□□□□□ -0.93
CTSA-209ENST00000493522 FOXB2Q5VYV0 432 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms