RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ERVK-18Q9QC07 812 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 UBQLN2Q9UHD9 624 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 LINC00527Q9UJ94 153 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 RPUSD1Q9UJJ7 312 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PRPF19Q9UMS4 504 aaKnown RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 FOXA2Q9Y261 457 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-218ENST00000493430 PIGLQ9Y2B2 252 aa2.21□□□□□ -2.06
PTCD3-218ENST00000493430 A0A087WZ39 114 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV3-43A0A0B4J1X8 118 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 IGKV1-9A0A0C4DH69 117 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 KIR2DS1A0A191URI9 304 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM269A0A1B0GVZ9 245 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 A0A1B0GWJ7 208 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 A0A1W2PQL4 384 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 RFPL4AA6NLU0 287 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR2AT4A6NND4 320 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ANKRD30BLA7E2S9 258 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF879B4DU55 563 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LOC110117498-PIK3R3F6TDL0 507 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 RFPL4AL1F8VTS6 287 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 CCL24O00175 119 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 NPFFO15130 113 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ENTPD6O75354 484 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ENTPD5O75356 428 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 SAP30O75446 220 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LHBP01229 141 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 IGLV3-1P01715 115 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV3-43DP0DP04 118 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 CD28P10747 220 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ALOX5APP20292 161 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 C4BPBP20851 252 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 GLRA1P23415 457 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 HAAOP46952 286 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 DLX6P56179 175 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR12D2P58182 307 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 MRPS11P82912 194 aaKnown RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 DEFA5Q01523 94 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ECH1Q13011 328 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 IL18R1Q13478 541 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ATXN7L3Q14CW9 347 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 UBE2V2Q15819 145 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 C2orf83Q53S99 150 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LINC00242Q5T6M2 205 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 BCL2L15Q5TBC7 163 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR2G6Q5TZ20 316 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 GPR157Q5UAW9 335 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 AADACL4Q5VUY2 407 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LIPNQ5VXI9 398 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 SLX4IPQ5VYV7 408 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF322Q6U7Q0 402 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 BTNL8Q6UX41 500 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 DRAM2Q6UX65 266 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ACP7Q6ZNF0 438 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 SSX8Q7RTT4 187 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LHFPL3Q86UP9 236 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 YIPF7Q8N8F6 280 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ASCC1Q8N9N2 400 aaKnown RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR4S1Q8NGB4 309 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR13C9Q8NGT0 318 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR11L1Q8NGX0 322 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LINC01006Q8NI28 216 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ANGPTL6Q8NI99 470 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 CNIH3Q8TBE1 160 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 FAM81AQ8TBF8 368 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 CASTOR1Q8WTX7 329 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 AQP3Q92482 292 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 POP5Q969H6 163 aaKnown RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 CREB3L1Q96BA8 519 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR8B4Q96RC9 309 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 CNN2Q99439 309 aaKnown RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 TXN2Q99757 166 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 SUCNR1Q9BXA5 334 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR51I2Q9H344 312 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 FN3KRPQ9HA64 309 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF286AQ9HBT8 521 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 MTCH1Q9NZJ7 389 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 STX18Q9P2W9 335 aaKnown RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 LAMP5Q9UJQ1 280 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 GNG8Q9UK08 70 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 OR52A1Q9UKL2 312 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 RRP15Q9Y3B9 282 aaKnown RBP2.2□□□□□ -2.06
PTCD3-218ENST00000493430 HILPDAQ9Y5L2 63 aa2.2□□□□□ -2.06
PTCD3-218ENST00000493430 IGHV3-72A0A0B4J1Y9 119 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 PPIAL4CA0A0B4J2A2 164 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF816-ZNF321PA0A0X1KG74 233 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 PQLC2LA1A4F0 135 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 NKX6-3A6NJ46 265 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF736B4DX44 427 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-218ENST00000493430 G3V2T6 193 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 H3BSA7 217 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 J3QLI3 93 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 DLGAP1O14490 977 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 PHYHO14832 338 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 SLC31A2O15432 143 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 TNFSF12O43508 249 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 XRCC2O43543 280 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 NDUFB3O43676 98 aa2.19□□□□□ -2.06
PTCD3-218ENST00000493430 ENSAO43768 121 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms