RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 ATP5G1P05496 136 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 PPP1R2P41236 205 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 OMPP47874 163 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 PFN3P60673 137 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 CXCR4P61073 352 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 DAD1P61803 113 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 TMEM176BQ3YBM2 270 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-212ENST00000493341 LINC00483Q53H64 154 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 PPP1R2P3Q6NXS1 205 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 PRSS54Q6PEW0 395 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 ATP5L2Q7Z4Y8 100 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 ZBTB8OSQ8IWT0 167 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 TMEM75Q8N9X5 138 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 TMEM161BQ8NDZ6 487 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 OR8A1Q8NGG7 326 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 RBPMSQ93062 196 aaKnown RBP2.96□□□□□ -1.94
VPS13A-212ENST00000493341 OPTNQ96CV9 577 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 OR51I1Q9H343 314 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 RFNGQ9Y644 331 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 PHRF1Q9P1Y6 1649 aaKnown RBP2.96□□□□□ -1.94
VPS13A-212ENST00000493341 PCM1Q15154 2024 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 COL14A1Q05707 1796 aaKnown RBP2.95□□□□□ -1.94
VPS13A-212ENST00000493341 TGIF2-C20orf24A0A0A6YYL0 155 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 ARGFXA6NJG6 315 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 COPEO14579 308 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 REG1AP05451 166 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 KRTAP1-4P0C5Y4 121 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 OR4A8P0C604 315 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 NTF3P20783 257 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 NPY1RP25929 384 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 CCR7P32248 378 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 LSM6P62312 80 aaKnown RBP2.95□□□□□ -1.94
VPS13A-212ENST00000493341 LRRC75BQ2VPJ9 315 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 MRPL2Q5T653 305 aaKnown RBP2.95□□□□□ -1.94
VPS13A-212ENST00000493341 SYPL2Q5VXT5 272 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 IGFL2Q6UWQ7 119 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 OR8S1Q8NH09 359 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 APOBEC3DQ96AK3 386 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-212ENST00000493341 PEBP4Q96S96 227 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 SLC22A13Q9Y226 551 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 ATRNO75882 1429 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 IGHV1-45A0A0A0MS14 117 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 IZUMO1RA6ND01 250 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 EVPLLA8MZ36 301 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 OR7C2O60412 319 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 OR5AC1P0C628 307 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 ORM2P19652 201 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 EVI2BP34910 448 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 OR10K2Q6IF99 312 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 SAXO1Q8IYX7 474 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 MIR7-3HGQ8N6C7 128 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 SLC35G3Q8N808 338 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 TMEM105Q8N8V8 129 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 SPPL2BQ8TCT7 592 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 DGCR14Q96DF8 476 aaKnown RBP2.95□□□□□ -1.94
VPS13A-212ENST00000493341 TSSK6Q9BXA6 273 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 SLC2A9Q9NRM0 540 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 NRKQ7Z2Y5 1582 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 MON2Q7Z3U7 1717 aa2.95□□□□□ -1.94
VPS13A-212ENST00000493341 COL2A1P02458 1487 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-212ENST00000493341 ATP7BP35670 1465 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 BRWD3Q6RI45 1802 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 WNK3Q9BYP7 1800 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 SLIT2O94813 1529 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 TNS3Q68CZ2 1445 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 IGLV3-16A0A075B6K0 115 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 K7EQS6 105 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 POP7O75817 140 aaKnown RBP2.94□□□□□ -1.94
VPS13A-212ENST00000493341 CRYBA1P05813 215 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 IL3P08700 152 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 FBP1P09467 338 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 CD36P16671 472 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 MYL12AP19105 171 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 SLCO1A2P46721 670 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 REG1BP48304 166 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 INPP1P49441 399 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 PDK2Q15119 407 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 SPOPLQ6IQ16 392 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 EBLN2Q6P2I7 272 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 TMEM144Q7Z5S9 345 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 Q8N7P7 452 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 GPR32P1Q8NGA4 272 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 OR51D1Q8NGF3 324 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 C16orf78Q8WTQ4 265 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 ASB17Q8WXJ9 295 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 MAL2Q969L2 176 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 OTUB2Q96DC9 234 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 OR52B2Q96RD2 323 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 EBNA1BP2Q99848 306 aaKnown RBP2.94□□□□□ -1.94
VPS13A-212ENST00000493341 PLA2G12AQ9BZM1 189 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 LINC00574Q9H8X3 128 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 UBQLN4Q9NRR5 601 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 LINC00527Q9UJ94 153 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 SLC22A7Q9Y694 548 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 ADAMTS9Q9P2N4 1935 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 LMO7Q8WWI1 1683 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 GLI3P10071 1580 aa2.94□□□□□ -1.94
VPS13A-212ENST00000493341 TEX50A0A1B0GTY4 177 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 CISD3P0C7P0 127 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 OR13C7P0DN81 318 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms