RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 RNFT1Q5M7Z0 435 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 DRAM1Q8N682 238 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GALMQ96C23 342 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
TNFRSF1B-203ENST00000492361 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 YKT6O15498 198 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FCGR3BO75015 233 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 CA11O75493 328 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 HBE1P02100 147 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GCH1P30793 250 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TAS2R30P59541 319 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 DMXL2Q8TDJ6 3036 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 LRP5LA4QPB2 252 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 MPV17P39210 176 aa12.88□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SPINK4O60575 86 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZG16O60844 167 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ICAM4Q14773 271 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 RNF212Q495C1 297 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FBXW9Q5XUX1 488 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 RNF122Q9H9V4 155 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PHOX2AO14813 284 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 S1PR2O95136 353 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 HAND1O96004 215 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 UCP1P25874 307 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SPSB3Q6PJ21 355 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FOXL2NBQ6ZUU3 175 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GAR1Q9NY12 217 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 KLF13Q9Y2Y9 288 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OTOGLQ3ZCN5 2332 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 DNPH1O43598 174 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SPRY3O43610 288 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PSPNO60542 156 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZNF383Q8NA42 475 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR5B12Q96R08 314 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 KIAA1456Q9P272 454 aa12.87□□□□□ -0.35
TNFRSF1B-203ENST00000492361 IL18BPO95998 194 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ZNF83P51522 516 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 IL24Q13007 206 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 RCC1LQ96I51 464 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 NCKAP5O14513 1909 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SPAARA0A1B0GVQ0 90 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 H0Y980 276 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 J3QT63 122 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PLXNB1O43157 2135 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 NAPSAO96009 420 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 UCP3P55916 312 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GCSAMLQ5JQS6 135 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SSMEM1Q8WWF3 244 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SH2D2AQ9NP31 389 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ATRXP46100 2492 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PAGE4O60829 102 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ID3Q02535 119 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 C10orf91Q5T1B1 145 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1B-203ENST00000492361 C5orf52A6NGY3 159 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 ACTL6BO94805 426 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 COL8A2P25067 703 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 MDH2P40926 338 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PRAMEF5Q5TYX0 476 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 NCR3LG1Q68D85 454 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 GFOD1Q9NXC2 390 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 POLDIP2Q9Y2S7 368 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TRAV38-1A0A0B4J264 116 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PGPEP1LA6NFU8 196 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 C17orf98A8MV24 154 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PSG7Q13046 419 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 VWA1Q6PCB0 445 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 C1orf87Q8N0U7 546 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FER1L6-AS2Q96M78 137 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TLN1Q9Y490 2541 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 H7BYZ3 331 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 M0R1X1 148 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 HBZP02008 142 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 S100A8P05109 93 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 PAX9P55771 341 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TFF3Q07654 80 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 DEFB109BQ30KR1 87 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 SSX7Q7RTT5 188 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR10G4Q8NGN3 311 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR10G9Q8NGN4 311 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 OR10G7Q8NGN6 311 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TMEM56Q96MV1 263 aa12.85□□□□□ -0.35
TNFRSF1B-203ENST00000492361 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms