RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 OR8U1Q8NH10 309 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 COQ8AQ8NI60 647 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 RFESDQ8TAC1 157 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 SECTM1Q8WVN6 248 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 CLEC7AQ9BXN2 247 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 OR51J1Q9H342 316 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 NAA60Q9H7X0 242 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 ALG5Q9Y673 324 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 MALRD1Q5VYJ5 2156 aa7.92□□□□□ -1.14
USP54-214ENST00000492357 ARID1AO14497 2285 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 ANKRD17O75179 2603 aaKnown RBP7.91□□□□□ -1.14
USP54-214ENST00000492357 DCHS2Q6V1P9 2916 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 IGHV4-30-2A0A087WSY4 118 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 A0A096LNT2 108 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 A0A0A6YYJ9 748 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 A0A0B4J293 547 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 IGKV1D-13A0A0B4J2D9 117 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 TEX13DA0A0J9YY54 714 aaPredicted RBP7.91□□□□□ -1.14
USP54-214ENST00000492357 DBX1A6NMT0 343 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 J3QR06 171 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 SNAPC5O75971 98 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 IGLV1-47P01700 117 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 IGKV1-13P0DP09 117 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 RRASP10301 218 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 CCL3L1P16619 93 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 ANXA7P20073 488 aaKnown RBP7.91□□□□□ -1.14
USP54-214ENST00000492357 UCP1P25874 307 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 CEACAM3P40198 252 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 GPR12P47775 334 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 GZMKP49863 264 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 BPIFB3P59826 476 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 PPP1R1AQ13522 171 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 Q5PR19 223 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 DHRS7BQ6IAN0 325 aaPredicted RBP7.91□□□□□ -1.14
USP54-214ENST00000492357 ZNF818PQ6ZRF7 136 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 C12orf45Q8N5I9 185 aaPredicted RBP7.91□□□□□ -1.14
USP54-214ENST00000492357 DRAM1Q8N682 238 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 TMEM230Q96A57 120 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 TMEM56Q96MV1 263 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 AIFM2Q9BRQ8 373 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 PCGF1Q9BSM1 259 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 TMEM222Q9H0R3 208 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 MED28Q9H204 178 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 OR2D2Q9H210 308 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 IFI27L2Q9H2X8 130 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 RAB18Q9NP72 206 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 CCL28Q9NRJ3 127 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 CACFD1Q9UGQ2 172 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 FLVCR2Q9UPI3 526 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 PSG11Q9UQ72 335 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 PRELID3BQ9Y3B1 194 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 INSIG2Q9Y5U4 225 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 TMEM56-RWDD3S4R434 201 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 LRBAP50851 2863 aa7.91□□□□□ -1.14
USP54-214ENST00000492357 NAV2Q8IVL1 2488 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 IGHV4-61A0A0C4DH41 118 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 C3orf85A0A1B0GTC6 90 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 RNF223E7ERA6 249 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 TOR1AO14656 332 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 ST8SIA5O15466 376 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 PHF1O43189 567 aaPredicted RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 PGLYRP1O75594 196 aaPredicted RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 CDS2O95674 445 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 IGLV2-14P01704 120 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 MSMBP08118 114 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 VSIG10L2P0DP72 767 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 AKR1C4P17516 323 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 VAMP1P23763 118 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 NFYBP25208 207 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 THBS3P49746 956 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 DVL1P1P54792 670 aaPredicted RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 SUPT4H1P63272 117 aaKnown RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 CYCSP99999 105 aaKnown RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 PAX8Q06710 450 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 EIF4EBP1Q13541 118 aaPredicted RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 GNMTQ14749 295 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 HLA-DRB5Q30154 266 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 CT45A1Q5HYN5 189 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 PRAMEF5Q5TYX0 476 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 LIN54Q6MZP7 749 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 ZNF833PQ6ZTB9 187 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 GLCCI1Q86VQ1 547 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 LGI3Q8N145 548 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 ABHD12Q8N2K0 398 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 FGFRL1Q8N441 504 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 CT45A3Q8NHU0 189 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 TMPRSS13Q9BYE2 586 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 SIRPDQ9H106 197 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 LPAR2Q9HBW0 351 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 TMED3Q9Y3Q3 217 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 TBL2Q9Y4P3 447 aaKnown RBP7.9□□□□□ -1.14
USP54-214ENST00000492357 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.14
USP54-214ENST00000492357 SPG11Q96JI7 2443 aa7.9□□□□□ -1.15
USP54-214ENST00000492357 IGHV2-26A0A0B4J1V2 119 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 SSNA1O43805 119 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 FGF2P09038 288 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 SULT1A3P0DMM9 295 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 SULT1A4P0DMN0 295 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 SLC25A6P12236 298 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms