RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	OR3A3	P47888	321 aa		13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	PYHIN1	Q6K0P9	492 aa		13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	C6orf201	Q7Z4U5	140 aa		13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	SVOP	Q8N4V2	548 aa		13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	IL1F10	Q8WWZ1	152 aa		13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	IFI27L2	Q9H2X8	130 aa		13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.92	□□□□□ -0.18
GGA1-223	ENST00000491295	TRBV6-6	A0A0A6YYG2	114 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	RRH	O14718	337 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	OVOL1	O14753	267 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	ARPC1B	O15143	372 aa	Known RBP	13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	HTR2C	P28335	458 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	RANBP1	P43487	201 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	GABPB1	Q06547	395 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	C19orf54	Q5BKX5	351 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	ASPHD1	Q5U4P2	390 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	LRRTM1	Q86UE6	522 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	EDARADD	Q8WWZ3	215 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	RBMXL1	Q96E39	390 aa	Known RBP	13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	PLEKHJ1	Q9NW61	149 aa		13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	FOXA2	Q9Y261	457 aa	Predicted RBP	13.91	□□□□□ -0.18
GGA1-223	ENST00000491295	C3orf84	H3BNL1	204 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	SLC22A1	O15245	554 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	CDK1	P06493	297 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	GSTP1	P09211	210 aa	Known RBP	13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	GNB1	P62873	340 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	CX3CL1	P78423	397 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	RCN1	Q15293	331 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	HSD17B12	Q53GQ0	312 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	RBM48	Q5RL73	367 aa	Known RBP	13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	OR10K2	Q6IF99	312 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	CD200R1L	Q6Q8B3	271 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	C5orf24	Q7Z6I8	188 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	OR5AN1	Q8NGI8	311 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	DCUN1D4	Q92564	292 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	URM1	Q9BTM9	101 aa	Known RBP	13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	NUBP2	Q9Y5Y2	271 aa		13.9	□□□□□ -0.18
GGA1-223	ENST00000491295	TMEM14DP	A8MWL7	114 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	CASQ2	O14958	399 aa	Predicted RBP	13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	LY86	O95711	162 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	CT45A6	P0DMU7	189 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	CT45A5	P0DMU8	189 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	CT45A7	P0DMV0	189 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	ZBTB25	P24278	435 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	CD40LG	P29965	261 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	QRFP	P83859	136 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	PLGLA	Q15195	96 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	SPHAR	Q15513	63 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	AKIRIN2	Q53H80	203 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	FAM131A	Q6UXB0	335 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	CEACAM19	Q7Z692	300 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	OR6M1	Q8NGM8	313 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	OR5B12	Q96R08	314 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	AGMAT	Q9BSE5	352 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	TMED9	Q9BVK6	235 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	TOLLIP	Q9H0E2	274 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	VCX	Q9H320	206 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	WASHC3	Q9Y3C0	194 aa		13.89	□□□□□ -0.19
GGA1-223	ENST00000491295	SORL1	Q92673	2214 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295		A0A1W2PN81	502 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	LINC01619	G3V211	115 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295		H0YJW9	148 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	ST8SIA5	O15466	376 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	LGALS1	P09382	135 aa	Known RBP	13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	UCHL1	P09936	223 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	CHRNA7	P36544	502 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	UNC119	Q13432	240 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	INSL4	Q14641	139 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	ZNF562	Q6V9R5	426 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	FAM89B	Q8N5H3	189 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	PTX4	Q96A99	478 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	FLYWCH2	Q96CP2	140 aa	Known RBP	13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	FBXL15	Q9H469	300 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295	HSF4	Q9ULV5	492 aa		13.88	□□□□□ -0.19
GGA1-223	ENST00000491295		H7C2Y5	167 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	SOX15	O60248	233 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	ECSCR	Q19T08	205 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	RPL39P5	Q59GN2	51 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	OR6Q1	Q8NGQ2	317 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	SETD6	Q8TBK2	473 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	DLX4	Q92988	240 aa	Predicted RBP	13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	CYYR1	Q96J86	154 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	ASCL2	Q99929	193 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	NICN1	Q9BSH3	213 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	SLA2	Q9H6Q3	261 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	ISYNA1	Q9NPH2	558 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	TPSG1	Q9NRR2	321 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	SCN3B	Q9NY72	215 aa		13.87	□□□□□ -0.19
GGA1-223	ENST00000491295	PTGES3L	E9PB15	166 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	HSPA12A	O43301	675 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	SAP30	O75446	220 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	SPDEF	O95238	335 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	HSPB1	P04792	205 aa	Known RBP	13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	OR8U9	P0C7N5	309 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	EGR2	P11161	476 aa	Predicted RBP	13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	ARSB	P15848	533 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	CEACAM6	P40199	344 aa		13.86	□□□□□ -0.19
GGA1-223	ENST00000491295	NDP	Q00604	133 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms