RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 IMMP2LQ96T52 175 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PFDN5Q99471 154 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NKX3-1Q99801 234 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RARRES2Q99969 163 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KLHDC3Q9BQ90 382 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PYGO2Q9BRQ0 406 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NIPSNAP3BQ9BS92 247 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PSMG3Q9BT73 122 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ADAT1Q9BUB4 502 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 LRRC61Q9BV99 259 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 BCL2L14Q9BZR8 327 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ACTR3CQ9C0K3 210 aaPredicted RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 STRADBQ9C0K7 418 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 VN1R1Q9GZP7 353 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM222Q9H0R3 208 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KCNK15Q9H427 330 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 C11orf1Q9H5F2 150 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM231Q9H6L2 316 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 METTL7AQ9H8H3 244 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 WDR54Q9H977 334 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 WFDC1Q9HC57 220 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MED29Q9NX70 200 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PLEK2Q9NYT0 353 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 KLRF1Q9NZS2 232 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 DOK5Q9P104 306 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PEMTQ9UBM1 199 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 DHCR7Q9UBM7 475 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FBXL17Q9UF56 701 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NXT1Q9UKK6 140 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 RARRES3Q9UL19 164 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 TCF19Q9Y242 345 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ST3GAL6Q9Y274 331 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 POLR1DQ9Y2S0 133 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 NOSIPQ9Y314 301 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 LSM5Q9Y4Y9 91 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 PUS1Q9Y606 427 aaKnown RBP eCLIP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 MTCH2Q9Y6C9 303 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 WSB1Q9Y6I7 421 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ASCC3Q8N3C0 2202 aaKnown RBP1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 SHANK1Q9Y566 2161 aa1.72□□□□□ -2.13
SNRNP40-207ENST00000491106 FER1L5A0AVI2 2057 aa1.71□□□□□ -2.13
SNRNP40-207ENST00000491106 PCNTO95613 3336 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 HCFC1P51610 2035 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TNRC6AQ8NDV7 1962 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV3D-15A0A087WSY6 115 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1D-8A0A087WSZ0 117 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LOC102723996A0A087X1L8 192 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TRBV6-6A0A0A6YYG2 114 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IGHV1OR15-9A0A0B4J2B8 117 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV3D-20A0A0C4DH25 116 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IGHV3-20A0A0C4DH32 117 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A0J9YW62 118 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TRBV11-1A0A0K0K1C0 115 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF816-ZNF321PA0A0X1KG74 233 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PP11 408 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PPE3 182 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SMCO3A2RU48 225 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 NKX2-6A6NCS4 301 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5H1A6NKK0 313 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF727A8MUV8 499 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LINC00587B1AMM8 73 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM90A26D6RGX4 464 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TSTD3H0UI37 97 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TRAPPC2LH3BP13 241 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 K7N7A8 449 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 M0QZK8 103 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 M0R135 149 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GEMIN2O14893 280 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PPP1R2P9O14990 202 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SIGLEC5O15389 551 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PHF1O43189 567 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TXNL1O43396 289 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PPIHO43447 177 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SYNGR2O43760 224 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SYNGR3O43761 229 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 NME2P1O60361 137 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GGCTO75223 188 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PDCD6O75340 191 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF737O75373 536 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PGLYRP1O75594 196 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2J2O76002 312 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 YIF1AO95070 293 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 VENTXO95231 258 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CYB5R3P00387 301 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PPYP01298 95 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IFNA1P01562 189 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TRGC2P03986 189 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OPN1MWP04001 364 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 HPNP05981 417 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SERPINE2P07093 398 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PFN1P07737 140 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FBP1P09467 338 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OPN1MW2P0DN77 364 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OPN1MW3P0DN78 364 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR13C7P0DN81 318 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FGF5P12034 268 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 IL11P20809 199 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 AADACP22760 399 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms