RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 EFNA2O43921 213 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 TIAF1O95411 115 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 AMBPP02760 352 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 DEFA4P12838 97 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.64
SHOX2-205ENST00000490689 KLHDC1Q8N7A1 406 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 KDF1Q8NAX2 398 aaPredicted RBP11.02□□□□□ -0.64
SHOX2-205ENST00000490689 IMMP2LQ96T52 175 aa11.02□□□□□ -0.64
SHOX2-205ENST00000490689 PMS2P1A4D2B8 440 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 FGF5P12034 268 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 ATOH7Q8N100 152 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 GPR35Q9HC97 309 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 LRRK1Q38SD2 2015 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 DIRC3C9JPN6 131 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 KBTBD11O94819 623 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 IRF2P14316 349 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 FGFRL1Q8N441 504 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 SEBOXQ9HB31 216 aaPredicted RBP11.02□□□□□ -0.65
SHOX2-205ENST00000490689 IGHV2-5P01817 119 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 CBLN1P23435 193 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 GNG4P50150 75 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 SELENOVP59797 346 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 HLA-DRB5Q30154 266 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 KCNE4Q8WWG9 221 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 STRADBQ9C0K7 418 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 ATP23Q9Y6H3 246 aa11.02□□□□□ -0.65
SHOX2-205ENST00000490689 BPTFQ12830 3046 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 A6NNC1 897 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 ZIC3O60481 467 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 CSRP1P21291 193 aaKnown RBP11.01□□□□□ -0.65
SHOX2-205ENST00000490689 ARR3P36575 388 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 TUSC5Q8IXB3 177 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 ZNF596Q8TC21 504 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 ACY3Q96HD9 319 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 C18orf12Q96KH6 178 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 M0QZK8 103 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 GGCTO75223 188 aaKnown RBP11.01□□□□□ -0.65
SHOX2-205ENST00000490689 OR5G3P0C626 314 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 CCL4P13236 92 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 LIFP15018 202 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 OR51G1Q8NGK1 321 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 OR4P4Q8NGL7 312 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 PGPEP1LA6NFU8 196 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 HINT1P49773 126 aaPredicted RBP11.01□□□□□ -0.65
SHOX2-205ENST00000490689 HGFACQ04756 655 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
SHOX2-205ENST00000490689 SPINK14Q6IE38 97 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 S1PR3Q99500 378 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 KCNIP2Q9NS61 270 aa11.01□□□□□ -0.65
SHOX2-205ENST00000490689 TMEM30CPA0ZSE6 113 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 DCAF12Q5T6F0 453 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 RBMXL3Q8N7X1 1067 aaKnown RBP11□□□□□ -0.65
SHOX2-205ENST00000490689 GATAD1Q8WUU5 269 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 GTF3AQ92664 365 aaKnown RBP11□□□□□ -0.65
SHOX2-205ENST00000490689 ZNF552Q9H707 407 aaPredicted RBP11□□□□□ -0.65
SHOX2-205ENST00000490689 ARHGAP21Q5T5U3 1957 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 CA11O75493 328 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 TCF23Q7RTU1 214 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 SLC24A4Q8NFF2 622 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 P2RX4Q99571 388 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 E9PLN8 166 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 TOX4O94842 621 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 CLPSP04118 112 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 OR10J4P0C629 311 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 UCP3P55916 312 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 FGF12P61328 243 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 C1QL4Q86Z23 238 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 ABHD14BQ96IU4 210 aa11□□□□□ -0.65
SHOX2-205ENST00000490689 IGKV1-12A0A0C4DH73 117 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 ZG16O60844 167 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 HPRT1P00492 218 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 IGKV1D-12P01611 117 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 CD55P08174 381 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 AESQ08117 197 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 WDR61Q9GZS3 305 aaKnown RBP10.99□□□□□ -0.65
SHOX2-205ENST00000490689 CLDN16Q9Y5I7 305 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 NPIPB13A6NJU9 1138 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 C1QTNF9BB2RNN3 333 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 NPIPB4C9JG80 1138 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 CEBPDP49716 269 aaPredicted RBP10.99□□□□□ -0.65
SHOX2-205ENST00000490689 ATP6V1FQ16864 119 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 RPEL1Q2QD12 228 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 ZNF664Q8N3J9 261 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 CISD2Q8N5K1 135 aaKnown RBP10.99□□□□□ -0.65
SHOX2-205ENST00000490689 TFPI2P48307 235 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 RPL23P62829 140 aaKnown RBP10.99□□□□□ -0.65
SHOX2-205ENST00000490689 TCTEX1D1Q8N7M0 179 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 TAAR6Q96RI8 345 aa10.99□□□□□ -0.65
SHOX2-205ENST00000490689 SRSF10O75494 262 aaKnown RBP10.98□□□□□ -0.65
SHOX2-205ENST00000490689 OR4A8P0C604 315 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 LYL1P12980 280 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 UBE2G1P62253 170 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 COTL1Q14019 142 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms