RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 LSAMPQ13449 338 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 KIAA0141Q14154 515 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 HMGN3Q15651 99 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 SSX1Q16384 188 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 DEFB136Q30KP8 78 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 C2orf76Q3KRA6 126 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 RPL39P5Q59GN2 51 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 C6orf183Q5T699 404 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 GLT8D1Q68CQ7 371 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 GLDNQ6ZMI3 551 aaPredicted RBP5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 SYT8Q8NBV8 401 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 OR51D1Q8NGF3 324 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 SETD6Q8TBK2 473 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 CHPT1Q8WUD6 406 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 UFD1Q92890 307 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 ABHD14BQ96IU4 210 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 NEDD4LQ96PU5 975 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 YPEL2Q96QA6 119 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 ZNF251Q9BRH9 671 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 CCDC90BQ9GZT6 254 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 KLK15Q9H2R5 256 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 TMPRSS5Q9H3S3 457 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 OR1A1Q9P1Q5 309 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 GHRLQ9UBU3 117 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 AK3Q9UIJ7 227 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 RNF150Q9ULK6 438 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 TPRKBQ9Y3C4 175 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 WSB1Q9Y6I7 421 aa5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
PRPF4B-208ENST00000490653 A0A0B4J203 849 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 IGKV1-6A0A0C4DH72 117 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 ERICH4A6NGS2 130 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 NUDT19A8MXV4 375 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 FCN1O00602 326 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 LDLRAD4O15165 306 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 NAPSAO96009 420 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 CT45A6P0DMU7 189 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 CT45A5P0DMU8 189 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 CT45A7P0DMV0 189 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 CPEP16870 476 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 IL3RAP26951 378 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 MAPK3P27361 379 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 VEGFCP49767 419 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 OR10A3P58181 314 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 ACTBP60709 375 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 HTD2P86397 168 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 CFHR3Q02985 330 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 PNLIPRP3Q17RR3 467 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 MOGAT2Q3SYC2 334 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 Q3ZCU0 254 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 DEFB121Q5J5C9 76 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 PLAC9Q5JTB6 97 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 HES5Q5TA89 166 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 FAM89BQ8N5H3 189 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 FAM71E2Q8N5Q1 922 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 NKAIN3Q8N8D7 197 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 KLHL30-AS1Q8NEE0 82 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 KCNG3Q8TAE7 436 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 IL1F10Q8WWZ1 152 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 PHYHIPQ92561 330 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 ARHGAP5-AS1Q96IT6 56 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 CNBD2Q96M20 576 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 KCTD7Q96MP8 289 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 P2RX4Q99571 388 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 MGLLQ99685 303 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 RASL11BQ9BPW5 248 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 ABHD14AQ9BUJ0 271 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 TMEM59Q9BXS4 323 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 PECRQ9BY49 303 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 ANKRD60Q9BZ19 345 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 C11orf54Q9H0W9 315 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 IFI27L2Q9H2X8 130 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 LIN7CQ9NUP9 197 aaKnown RBP5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 PLEKHJ1Q9NW61 149 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 KCNIP1Q9NZI2 227 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 ZNF107Q9UII5 783 aaPredicted RBP5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 FBXO7Q9Y3I1 522 aa5.71□□□□□ -1.5
PRPF4B-208ENST00000490653 SAA2-SAA4A0A096LPE2 208 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 IGHV7-81A0A0B4J1V7 117 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 TMEM272A0A1B0GTI8 110 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 SMIM30A4D0T7 59 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 CCL24O00175 119 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 AP4M1O00189 453 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 SLC17A2O00624 439 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 CA11O75493 328 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 BPNT1O95861 308 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 UBBP0CG47 229 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 SAA2P0DJI9 122 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 EGR2P11161 476 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 CALRP27797 417 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 PPIFP30405 207 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 MYCNOSP40205 109 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 NDPQ00604 133 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 MLLT11Q13015 90 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 MMDQ15546 238 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 STEAP3Q658P3 488 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 TRAT1Q6PIZ9 186 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 IZUMO2Q6UXV1 221 aa5.7□□□□□ -1.5
PRPF4B-208ENST00000490653 ZNF833PQ6ZTB9 187 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms