RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 TEX36Q5VZQ5 186 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 ZNF561Q8N587 486 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 TMEM246Q9BRR3 403 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 C19orf24Q9BVV8 132 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 SUCNR1Q9BXA5 334 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 DNTTIP1Q9H147 329 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 PRR13Q9NZ81 148 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 ANK2Q01484 3957 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 C5orf51A6NDU8 294 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 C12orf77C9JDV5 145 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 K7N7A8 449 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 TCF21O43680 179 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 MUC1P15941 1255 aaPredicted RBP12.9□□□□□ -0.34
PCCB-218ENST00000490504 IFITM2Q01629 132 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 C1orf87Q8N0U7 546 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 SDSLQ96GA7 329 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 PATZ1Q9HBE1 687 aaKnown RBP12.9□□□□□ -0.34
PCCB-218ENST00000490504 DSCAML1Q8TD84 2053 aa12.9□□□□□ -0.34
PCCB-218ENST00000490504 MPPED1O15442 326 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 OR5AC1P0C628 307 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 CYCSP99999 105 aaKnown RBP12.89□□□□□ -0.35
PCCB-218ENST00000490504 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 TMEM187Q14656 261 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 LDLRAD3Q86YD5 345 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 OR10V1Q8NGI7 309 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 OR5D13Q8NGL4 314 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 OR1L1Q8NH94 360 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 MRGPRDQ8TDS7 321 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 GALMQ96C23 342 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 SEC22AQ96IW7 307 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 NMES1Q9C002 83 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 METTL8Q9H825 291 aaKnown RBP12.89□□□□□ -0.35
PCCB-218ENST00000490504 COMMD9Q9P000 198 aa12.89□□□□□ -0.35
PCCB-218ENST00000490504 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 ODAMA1E959 279 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 HMSDA8MTL9 139 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 HSD17B6O14756 317 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 ADAP1O75689 374 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 HBZP02008 142 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 S100GP29377 79 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 LUMP51884 338 aaPredicted RBP12.88□□□□□ -0.35
PCCB-218ENST00000490504 CMTM1Q8IZ96 169 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 TPRX1Q8N7U7 411 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 GON7Q9BXV9 100 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 SLA2Q9H6Q3 261 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 MMP26Q9NRE1 261 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 RDH8Q9NYR8 311 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 MAB21L2Q9Y586 359 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 TRAV38-1A0A0B4J264 116 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
PCCB-218ENST00000490504 J3QLI3 93 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 LGALS8O00214 317 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 RGS13O14921 159 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 FOXH1O75593 365 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 CEACAM6P40199 344 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 P2RX3P56373 397 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 LGALSLQ3ZCW2 172 aaPredicted RBP12.88□□□□□ -0.35
PCCB-218ENST00000490504 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 TBC1D26Q86UD7 250 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 LRTM2Q8N967 370 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 ZNRF1Q8ND25 227 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 DEFB108BQ8NET1 73 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 FAM234AQ9H0X4 552 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 C7orf69Q9H7B7 122 aa12.88□□□□□ -0.35
PCCB-218ENST00000490504 FXYD6-FXYD2A0A087WZ82 144 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 C3orf85A0A1B0GTC6 90 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 NKX6-3A6NJ46 265 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 SPINT2O43291 252 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 VENTXO95231 258 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 GYPAP02724 150 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 HOXB5P09067 269 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 GATA3P23771 443 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 SRPXP78539 464 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 SP6Q3SY56 376 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 LGI3Q8N145 548 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 BVESQ8NE79 360 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 ARL11Q969Q4 196 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 TOLLIPQ9H0E2 274 aa12.87□□□□□ -0.35
PCCB-218ENST00000490504 PAIP2BQ9ULR5 123 aaKnown RBP12.87□□□□□ -0.35
PCCB-218ENST00000490504 PPIAL4EA0A075B759 164 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 PPIAL4CA0A0B4J2A2 164 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 PPIAL4DF5H284 164 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 C15orf65H3BRN8 121 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 SIGLEC5O15389 551 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 IFNA21P01568 189 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 WNT2P09544 360 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 PPIAL4FP0DN26 164 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 SLC25A4P12235 298 aa12.86□□□□□ -0.35
PCCB-218ENST00000490504 GZMHP20718 246 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms