RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 DUS4LO95620 317 aaKnown RBP13.76□□□□□ -0.21
SEC13-218ENST00000490283 OR5H8P0DN80 308 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 F2RL1P55085 397 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 ACTBP60709 375 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 CXorf66Q5JRM2 361 aaPredicted RBP13.76□□□□□ -0.21
SEC13-218ENST00000490283 UBE2UQ5VVX9 321 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 C22orf42Q6IC83 251 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 RCC1LQ96I51 464 aaKnown RBP13.76□□□□□ -0.21
SEC13-218ENST00000490283 IFI27L2Q9H2X8 130 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 Q9N2K0 584 aa13.76□□□□□ -0.21
SEC13-218ENST00000490283 LINC01548A6NM66 108 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 ITGB1BP1O14713 200 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 LDLRAD4O15165 306 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 NBR2O15453 112 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 SLC2A2P11168 524 aaPredicted RBP13.75□□□□□ -0.21
SEC13-218ENST00000490283 IGLL1P15814 213 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 CEACAM6P40199 344 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 TMEM50BP56557 158 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 OR10A3P58181 314 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 SPARTQ8N0X7 666 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 GPR61Q9BZJ8 451 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 NECAP2Q9NVZ3 263 aa13.75□□□□□ -0.21
SEC13-218ENST00000490283 OR5H14A6NHG9 310 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 TRDCB7Z8K6 153 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 PLXNB1O43157 2135 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 RAB6AP20340 208 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 MC5RP33032 325 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 SERPINB10P48595 397 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 FOXE3Q13461 319 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 KIR2DS1Q14954 304 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 PLAC9Q5JTB6 97 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 Q6ZPA2 131 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 ZNF695Q8IW36 515 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 OR10R2Q8NGX6 335 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 HSPB9Q9BQS6 159 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 OR1A1Q9P1Q5 309 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 ZNF221Q9UK13 617 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
SEC13-218ENST00000490283 H7C2Y5 167 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 ELANEP08246 267 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 SCTP09683 121 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 ARL6IP1Q15041 203 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 PLGLAQ15195 96 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 FAM131AQ6UXB0 335 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 OR4A4PQ8NGN8 299 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 DPF1Q92782 380 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 ABHD14BQ96IU4 210 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 CHCHD6Q9BRQ6 235 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 C11orf54Q9H0W9 315 aaPredicted RBP13.73□□□□□ -0.21
SEC13-218ENST00000490283 STUB1Q9UNE7 303 aa13.73□□□□□ -0.21
SEC13-218ENST00000490283 A0A075B6Q4 140 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 SHISA3A0PJX4 238 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 RBBP9O75884 186 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 HLA-DRB1P01911 266 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 PRB2P02812 416 aaPredicted RBP13.72□□□□□ -0.21
SEC13-218ENST00000490283 IGF1P05019 195 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 GSTP1P09211 210 aaKnown RBP13.72□□□□□ -0.21
SEC13-218ENST00000490283 TALDO1P37837 337 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 MYCNOSP40205 109 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 THBS3P49746 956 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 C5orf64Q2M2E5 130 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 LIN54Q6MZP7 749 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 ZNF773Q6PK81 442 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 PTX4Q96A99 478 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 MCRIP2Q9BUT9 160 aaKnown RBP13.72□□□□□ -0.21
SEC13-218ENST00000490283 PARP11Q9NR21 331 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 TXNL4BQ9NX01 149 aaKnown RBP13.72□□□□□ -0.21
SEC13-218ENST00000490283 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 WASHC3Q9Y3C0 194 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 NOTCH3Q9UM47 2321 aa13.72□□□□□ -0.21
SEC13-218ENST00000490283 NOTOA8MTQ0 251 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 FABP7O15540 132 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 RPLP1P05386 114 aaKnown RBP13.71□□□□□ -0.21
SEC13-218ENST00000490283 CT45A6P0DMU7 189 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 CT45A5P0DMU8 189 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 CT45A7P0DMV0 189 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 HIST1H1DP16402 221 aaKnown RBP13.71□□□□□ -0.21
SEC13-218ENST00000490283 GNB3P16520 340 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 FGF9P31371 208 aaPredicted RBP13.71□□□□□ -0.21
SEC13-218ENST00000490283 PLA2G7Q13093 441 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 ARFRP1Q13795 201 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 FOXB2Q5VYV0 432 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 TMEM65Q6PI78 240 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 TPRA1Q86W33 373 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 MRPL41Q8IXM3 137 aaKnown RBP13.71□□□□□ -0.21
SEC13-218ENST00000490283 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 NPBQ8NG41 125 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 MRAPQ8TCY5 172 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 RBMXL1Q96E39 390 aaKnown RBP13.71□□□□□ -0.21
SEC13-218ENST00000490283 KCTD7Q96MP8 289 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 AGMATQ9BSE5 352 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 PARP12Q9H0J9 701 aaKnown RBP13.71□□□□□ -0.21
SEC13-218ENST00000490283 ATG5Q9H1Y0 275 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 OR51J1Q9H342 316 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 RDH8Q9NYR8 311 aa13.71□□□□□ -0.21
SEC13-218ENST00000490283 H0YJW9 148 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms