RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PLAC1Q9HBJ0 212 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 ADAP1O75689 374 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 FGF8P55075 233 aaPredicted RBP7.7□□□□□ -1.18
LSAMP-205ENST00000490035 MEF2BQ02080 365 aaPredicted RBP7.7□□□□□ -1.18
LSAMP-205ENST00000490035 NRN1LQ496H8 165 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 LAMTOR1Q6IAA8 161 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 PPP1R3EQ9H7J1 279 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 GZMMP51124 257 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 MVDP53602 400 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 C1orf100Q5SVJ3 147 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 GGACTQ9BVM4 153 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 ELF5Q9UKW6 265 aaPredicted RBP7.7□□□□□ -1.18
LSAMP-205ENST00000490035 CEACAM18A8MTB9 384 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 M0R3E3 92 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 FCGR3AP08637 254 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 COX7A1P24310 79 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 TWIST1Q15672 202 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 ZNF738Q8NE65 137 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 WNT2BQ93097 391 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 WIPI2Q9Y4P8 454 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 TSPOP30536 169 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 EIF4EBP2Q13542 120 aaPredicted RBP7.7□□□□□ -1.18
LSAMP-205ENST00000490035 DNM1P46Q6ZS02 220 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 TCF24Q7RTU0 167 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 OR2D3Q8NGH3 330 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 TSC2P49815 1807 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 FAM90A27PA6NNH2 459 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 DCAF10Q5QP82 559 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 CLEC2AQ6UVW9 174 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 MOGAT3Q86VF5 341 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 CCL28Q9NRJ3 127 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 DLL1O00548 723 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 TSPAN2O60636 221 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 CXCL3P19876 107 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 FCARP24071 287 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 FAM209BQ5JX69 171 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-205ENST00000490035 SLC35E4Q6ICL7 350 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 OR2I1PQ8NGU4 316 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 ABHD3Q8WU67 409 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-205ENST00000490035 ATP6V0CP27449 155 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 MAGEA5P43359 124 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 ZNF658BQ4V348 819 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-205ENST00000490035 CD200R1LQ6Q8B3 271 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 TP53RKQ96S44 253 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 NKX2-6A6NCS4 301 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 FAM214BQ7L5A3 538 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 OR4C13Q8NGP0 309 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 NRIP2Q9BQI9 281 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 MPZL1O95297 269 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 RPL8P62917 257 aaKnown RBP7.69□□□□□ -1.18
LSAMP-205ENST00000490035 C9orf40Q8IXQ3 194 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 HLA-DQB1P01920 261 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 PRF1P14222 555 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 UCP2P55851 309 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 RELQ04864 619 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-205ENST00000490035 TMEM91Q6ZNR0 172 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 PTPRDP23468 1912 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 CLDN14O95500 239 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 DEFB124Q8NES8 71 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 KIAA2026Q5HYC2 2103 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 PAGE4O60829 102 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 SGMS2Q8NHU3 365 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 AQP3Q92482 292 aa7.69□□□□□ -1.18
LSAMP-205ENST00000490035 ADAT3Q96EY9 351 aaPredicted RBP7.69□□□□□ -1.18
LSAMP-205ENST00000490035 TRAV9-1A0A075B6T8 112 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 TRGC1P0CF51 173 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 RPL27AP46776 148 aaKnown RBP7.68□□□□□ -1.18
LSAMP-205ENST00000490035 CEBPDP49716 269 aaPredicted RBP7.68□□□□□ -1.18
LSAMP-205ENST00000490035 SUCLG1P53597 346 aaKnown RBP7.68□□□□□ -1.18
LSAMP-205ENST00000490035 INSL4Q14641 139 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 DOK5Q9P104 306 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 FUT9Q9Y231 359 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 COL9A1P20849 921 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 IGFBP6P24592 240 aaPredicted RBP7.68□□□□□ -1.18
LSAMP-205ENST00000490035 MAS1LP35410 378 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 PXMP4Q9Y6I8 212 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 TRAV8-7A0A075B6U6 113 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 IFITM10A6NMD0 228 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 PLA2G10O15496 165 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 TTRP02766 147 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 PSG2P11465 335 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 LYZL2Q7Z4W2 148 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 PSMG3Q9BT73 122 aaPredicted RBP7.68□□□□□ -1.18
LSAMP-205ENST00000490035 RSG1Q9BU20 258 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 CISD1Q9NZ45 108 aaKnown RBP7.68□□□□□ -1.18
LSAMP-205ENST00000490035 LNP1A1A4G5 178 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 SPEM2Q0P670 501 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 C9orf50Q5SZB4 431 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 UQCR10Q9UDW1 63 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 TM4SF5O14894 197 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 TMPRSS3P57727 454 aa7.68□□□□□ -1.18
LSAMP-205ENST00000490035 IBA57Q5T440 356 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms