RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 S1PR3Q99500 378 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 PARP12Q9H0J9 701 aaKnown RBP8.76□□□□□ -1.01
VPS13D-210ENST00000489961 C11orf54Q9H0W9 315 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-210ENST00000489961 IFI27L2Q9H2X8 130 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 RAB18Q9NP72 206 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 NECAP2Q9NVZ3 263 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 ZNF221Q9UK13 617 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 ANAPC10Q9UM13 185 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 TCF19Q9Y242 345 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 RBM7Q9Y580 266 aaKnown RBP8.76□□□□□ -1.01
VPS13D-210ENST00000489961 SAA2-SAA4A0A096LPE2 208 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 IGHV1-3A0A0C4DH29 117 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 RNF212BA8MTL3 300 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 TIMM23O14925 209 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 GPR137BO60478 399 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 FCER2P06734 321 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 FAM106CPP0CH98 169 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 SAA2P0DJI9 122 aaPredicted RBP8.75□□□□□ -1.01
VPS13D-210ENST00000489961 NAT1P18440 290 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 TNFSF8P32971 234 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 RCVRNP35243 200 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 GPR12P47775 334 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 OR3A3P47888 321 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 TAS2R46P59540 309 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 ACTG1P63261 375 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 MRPS10P82664 201 aaKnown RBP8.75□□□□□ -1.01
VPS13D-210ENST00000489961 IL18Q14116 193 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 CDK10Q15131 360 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 KRTAP21-3Q3LHN1 58 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 FOXB2Q5VYV0 432 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 ODF3L1Q8IXM7 274 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 DRAM1Q8N682 238 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 OR56B4Q8NH76 319 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 PIFOQ8TCI5 191 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 CAPSLQ8WWF8 208 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 FCAMRQ8WWV6 532 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 SNAPC3Q92966 411 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 ABHD14BQ96IU4 210 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 ABHD1Q96SE0 405 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 AGMATQ9BSE5 352 aa8.75□□□□□ -1.01
VPS13D-210ENST00000489961 A6NDX4 124 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 FABP12A6NFH5 140 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 A6NHS1 94 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 GABARAPH6UMI1 98 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 RBBP9O75884 186 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR8U9P0C7N5 309 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR5H8P0DN80 308 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 NFYAP23511 347 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-210ENST00000489961 ACTBP60709 375 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 RNASE12Q5GAN4 147 aaKnown RBP8.74□□□□□ -1.01
VPS13D-210ENST00000489961 DHRS7BQ6IAN0 325 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-210ENST00000489961 ZNF833PQ6ZTB9 187 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 THNSL2Q86YJ6 484 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-210ENST00000489961 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR5H2Q8NGV7 314 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR8U1Q8NH10 309 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR52I2Q8NH67 350 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 CFHR4Q92496 578 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR2D2Q9H210 308 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 BATF3Q9NR55 127 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 EHFQ9NZC4 300 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 RNF150Q9ULK6 438 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 OR2W1Q9Y3N9 320 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 ZFHX3Q15911 3703 aa8.74□□□□□ -1.01
VPS13D-210ENST00000489961 FAM90A9PA6NNJ1 464 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 CTDSPLO15194 276 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 SNRNP70P08621 437 aaKnown RBP8.73□□□□□ -1.01
VPS13D-210ENST00000489961 CD24P25063 80 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 CD1BP29016 333 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 FCGR2CP31995 323 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 LUMP51884 338 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-210ENST00000489961 HES1Q14469 280 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 HABP2Q14520 560 aaPredicted RBP8.73□□□□□ -1.01
VPS13D-210ENST00000489961 ACTBL2Q562R1 376 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 RPL39P5Q59GN2 51 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 FAM131AQ6UXB0 335 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 C16orf82Q7Z2V1 217 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 TMEM219Q86XT9 240 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 AKR1E2Q96JD6 320 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 MRPL20Q9BYC9 149 aaKnown RBP8.73□□□□□ -1.01
VPS13D-210ENST00000489961 MTFP1Q9UDX5 166 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 GAB2Q9UQC2 676 aa8.73□□□□□ -1.01
VPS13D-210ENST00000489961 IGHV3-72A0A0B4J1Y9 119 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 J3QRK9 145 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 TUSC2O75896 110 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 SLC22A5O76082 557 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 IGKV1D-33P01593 117 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 IGKV1-33P01594 117 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 PMP2P02689 132 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 HKR1P10072 659 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 TMEM11P17152 192 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 HLA-DMAP28067 261 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 HRH1P35367 487 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 DGCR2P98153 550 aa8.72□□□□□ -1.01
VPS13D-210ENST00000489961 SSBP1Q04837 148 aaKnown RBP8.72□□□□□ -1.01
VPS13D-210ENST00000489961 LSAMPQ13449 338 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms