RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 VAMP1P23763 118 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 CD34P28906 385 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 PAX2Q02962 417 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 EIF4EBP1Q13541 118 aaPredicted RBP11.61□□□□□ -0.55
VPS26A-205ENST00000489656 PHLDA2Q53GA4 152 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 SLC25A48Q6ZT89 311 aaKnown RBP11.61□□□□□ -0.55
VPS26A-205ENST00000489656 C12orf45Q8N5I9 185 aaPredicted RBP11.61□□□□□ -0.55
VPS26A-205ENST00000489656 LINC00311Q8N616 119 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 DRAM1Q8N682 238 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 KIR3DL3Q8N743 410 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 PHB2Q99623 299 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 ABHD14AQ9BUJ0 271 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 OR2D2Q9H210 308 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 IFI27L2Q9H2X8 130 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 SESN1Q9Y6P5 492 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 POLQO75417 2590 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 TEX13DA0A0J9YY54 714 aaPredicted RBP11.6□□□□□ -0.55
VPS26A-205ENST00000489656 DBX1A6NMT0 343 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 ENSAO43768 121 aaKnown RBP11.6□□□□□ -0.55
VPS26A-205ENST00000489656 PFDN1O60925 122 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 FOXH1O75593 365 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 IFNA2P01563 188 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 ANXA3P12429 323 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 HLA-GP17693 338 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 NFYBP25208 207 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 ZNF134P52741 427 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 FCN2Q15485 313 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 C1orf122Q6ZSJ8 110 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 TBC1D26Q86UD7 250 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.6□□□□□ -0.55
VPS26A-205ENST00000489656 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 PSG11Q9UQ72 335 aa11.6□□□□□ -0.55
VPS26A-205ENST00000489656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■□□□□ 9
VPS26A-205ENST00000489656 MED13LQ71F56 2210 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 RNF212BA8MTL3 300 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 H0Y980 276 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 SLC31A2O15432 143 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 PGLYRP1O75594 196 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-205ENST00000489656 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
VPS26A-205ENST00000489656 TMEM187Q14656 261 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 UTF1Q5T230 341 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 HIST2H2BCQ6DN03 193 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 PRSS57Q6UWY2 283 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 AKAP14Q86UN6 197 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 OR11H7Q8NGC8 314 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 COQ8AQ8NI60 647 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 C5orf30Q96GV9 206 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 ABHD14BQ96IU4 210 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 TMEM133Q9H2Q1 129 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 UNKLQ9H9P5 680 aaKnown RBP11.59□□□□□ -0.55
VPS26A-205ENST00000489656 SDHAF2Q9NX18 166 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
VPS26A-205ENST00000489656 ASH1LQ9NR48 2969 aaKnown RBP11.59□□□□□ -0.55
VPS26A-205ENST00000489656 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 C3orf85A0A1B0GTC6 90 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 OR5AC1P0C628 307 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 F2RP25116 425 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 GPR12P47775 334 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 SRPXP78539 464 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 SLC9A3R2Q15599 337 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 ANKRD55Q3KP44 614 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 ODF3L1Q8IXM7 274 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 Q8N7P7 452 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 CASTOR1Q8WTX7 329 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 GLYATL2Q8WU03 294 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 LEAP2Q969E1 77 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 C1orf159Q96HA4 380 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 FAM212BQ9NTI7 297 aaPredicted RBP11.58□□□□□ -0.56
VPS26A-205ENST00000489656 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
VPS26A-205ENST00000489656 PIPOXQ9P0Z9 390 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
VPS26A-205ENST00000489656 NAV2Q8IVL1 2488 aa11.58□□□□□ -0.56
VPS26A-205ENST00000489656 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 PIGBOS1A0A0B4J2F0 54 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 J3QR06 171 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 RAB29O14966 203 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 CCNKO75909 580 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 CXCL3P19876 107 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 UCP1P25874 307 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 ZNF137PP52743 207 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 LIAT1Q6ZQX7 453 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 OR9G1Q8NH87 305 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 ASB13Q8WXK3 278 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 MSI2Q96DH6 328 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms