RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SEM1Q6ZVN7 128 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 ODF3L1Q8IXM7 274 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 COQ2Q96H96 371 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 HSD17B10Q99714 261 aaKnown RBP12.54□□□□□ -0.4
COL9A1-208ENST00000489611 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 TP53TG5Q9Y2B4 290 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 TRAV1-1A0A0B4J248 108 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 WNT9BO14905 357 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 C1QTNF9P0C862 333 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
COL9A1-208ENST00000489611 SERF2P84101 59 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 COL10A1Q03692 680 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 HFEQ30201 348 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 PRAMEF6Q5VXH4 476 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 SLC25A24Q6NUK1 477 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 PARP12Q9H0J9 701 aaKnown RBP12.54□□□□□ -0.4
COL9A1-208ENST00000489611 TUBA4BQ9H853 241 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 MSL2Q9HCI7 577 aa12.54□□□□□ -0.4
COL9A1-208ENST00000489611 PRDX2P32119 198 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 FHITP49789 147 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 TMPRSS3P57727 454 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
COL9A1-208ENST00000489611 RHEBQ15382 184 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 CR1LQ2VPA4 569 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 TMEM88Q6PEY1 159 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 Q6ZRM9 215 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 OR1L1Q8NH94 360 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 LRRC29Q8WV35 223 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 INTS1Q8N201 2190 aaKnown RBP12.53□□□□□ -0.4
COL9A1-208ENST00000489611 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
COL9A1-208ENST00000489611 C9JQL5 133 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 MGST3O14880 152 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.4
COL9A1-208ENST00000489611 ASCL1P50553 236 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 KLF3P57682 345 aaPredicted RBP12.52□□□□□ -0.4
COL9A1-208ENST00000489611 SELENOVP59797 346 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 C15orf54Q8N8G6 183 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 OR2Z1Q8NG97 314 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 SNX22Q96L94 193 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 CIB3Q96Q77 187 aaPredicted RBP12.52□□□□□ -0.4
COL9A1-208ENST00000489611 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.52□□□□□ -0.4
COL9A1-208ENST00000489611 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 HSPB7Q9UBY9 170 aa12.52□□□□□ -0.4
COL9A1-208ENST00000489611 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 C3orf80F5H4A9 247 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 C1QL1O75973 258 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 CLDN14O95500 239 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 UBE2KP61086 200 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 TNFRSF9Q07011 255 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 PINX1Q96BK5 328 aaKnown RBP12.52□□□□□ -0.41
COL9A1-208ENST00000489611 MLXQ9UH92 298 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 JPT1Q9UK76 154 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 FAM215AQ9Y5M1 114 aa12.52□□□□□ -0.41
COL9A1-208ENST00000489611 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 BOD1L1Q8NFC6 3051 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 IGLV3-9A0A075B6K5 115 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 P0C879 139 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF295-AS1Q8N0V1 137 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
COL9A1-208ENST00000489611 IGHV3-64DA0A0J9YX35 117 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 FAM90A9PA6NNJ1 464 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 RAB29O14966 203 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF737O75373 536 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 CLDN1O95832 211 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 F12P00748 615 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 FAM87AP0C7U9 286 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 GATA4P43694 442 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 NKX6-1P78426 367 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 SP5Q6BEB4 398 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF474Q6S9Z5 364 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 OR52L2PQ8NGH6 319 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 FAM57AQ8TBR7 257 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 M0R1B8 84 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 ITGB1BP1O14713 200 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 HSPB1P04792 205 aaKnown RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 FOLR2P14207 255 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
COL9A1-208ENST00000489611 GLIPR1P48060 266 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF83P51522 516 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 UCNP55089 124 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 FAM180AQ6UWF9 173 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 LILRB2Q8N423 598 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 ZNF525Q8N782 197 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 TCTEX1D2Q8WW35 142 aa12.5□□□□□ -0.41
COL9A1-208ENST00000489611 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms