RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 OR5H8P0DN80 308 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 IGLL1P15814 213 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 VDAC1P21796 283 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 FGF9P31371 208 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 HLA-DRB3P79483 266 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 PNLIPRP3Q17RR3 467 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 CXorf66Q5JRM2 361 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 C22orf42Q6IC83 251 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 CD200R1LQ6Q8B3 271 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 OR56B1Q8NGI3 324 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 EDARADDQ8WWZ3 215 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 FAM3DQ96BQ1 224 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 CYYR1Q96J86 154 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 KCTD7Q96MP8 289 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 NABP2Q9BQ15 211 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 MRPL20Q9BYC9 149 aaKnown RBP10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 KRTAP3-2Q9BYR7 98 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 OR51E2Q9H255 320 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 AK3Q9UIJ7 227 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 ZNF580Q9UK33 172 aa10.88□□□□□ -0.67
SPTLC1-207ENST00000488921 CCDC160A6NGH7 325 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 ITGB1BP1O14713 200 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 RAB29O14966 203 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 HSPA12AO43301 675 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 ZBTB25P24278 435 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 THBS3P49746 956 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 VEGFCP49767 419 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 F2RL1P55085 397 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 ACTBP60709 375 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 MRPS15P82914 257 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 FOXE3Q13461 319 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 FOXB2Q5VYV0 432 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 ANKRD13BQ86YJ7 626 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 CLVS1Q8IUQ0 354 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 LINC00482Q8N8I6 264 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 MRAPQ8TCY5 172 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 DPF1Q92782 380 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 ZNF251Q9BRH9 671 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 IFI27L2Q9H2X8 130 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 TXNL4BQ9NX01 149 aaKnown RBP10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 NDUFA13Q9P0J0 144 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 KIAA1456Q9P272 454 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 SLC23A1Q9UHI7 598 aa10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 ZNF107Q9UII5 783 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-207ENST00000488921 TRAV1-2A0A0B4J238 106 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 OR5H14A6NHG9 310 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 FOXI3A8MTJ6 420 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 NBR2O15453 112 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 ST8SIA5O15466 376 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 PRB2P02812 416 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 IGF1P05019 195 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 ELANEP08246 267 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 MYCNOSP40205 109 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 OR3A3P47888 321 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 CLDN12P56749 244 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 ETV3LQ6ZN32 361 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 C8orf86Q6ZUL3 223 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 C5orf24Q7Z6I8 188 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 ZNF695Q8IW36 515 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 CMSS1Q9BQ75 279 aaKnown RBP10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 HSPB9Q9BQS6 159 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 PECRQ9BY49 303 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 AURKAIP1Q9NWT8 199 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 RAB22AQ9UL26 194 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
SPTLC1-207ENST00000488921 HLA-DRB1P01911 266 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 SLC2A2P11168 524 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 TMBIM6P55061 237 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 TMEM50BP56557 158 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 LSM3P62310 102 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 HES5Q5TA89 166 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 Q6ZPA2 131 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 TPRA1Q86W33 373 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 MRPL41Q8IXM3 137 aaKnown RBP10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 RNF152Q8N8N0 203 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 RAB2BQ8WUD1 216 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 HDHD3Q9BSH5 251 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 Q9N2K0 584 aa10.85□□□□□ -0.67
SPTLC1-207ENST00000488921 TMEM272A0A1B0GTI8 110 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 SMIM31A0A1B0GVY4 71 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 LDLRAD4O15165 306 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 IGHG4P01861 327 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 RPLP1P05386 114 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 CD3GP09693 182 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 RAB3BP20337 219 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 MC5RP33032 325 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 CEACAM6P40199 344 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 CDX1P47902 265 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 CFHR3Q02985 330 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 FAM131AQ6UXB0 335 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 OR8U1Q8NH10 309 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 BCL7BQ9BQE9 202 aa10.84□□□□□ -0.67
SPTLC1-207ENST00000488921 CENPOQ9BU64 300 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms