RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FOXA2Q9Y261 457 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-231ENST00000488905 OR5H14A6NHG9 310 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 LGALS1P09382 135 aaKnown RBP14.24□□□□□ -0.13
HDAC6-231ENST00000488905 RPS27AP62979 156 aaKnown RBP14.24□□□□□ -0.13
HDAC6-231ENST00000488905 PLGLAQ15195 96 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 ZNF660Q6AZW8 331 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-231ENST00000488905 OR10K2Q6IF99 312 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 AHSA2Q719I0 299 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 C6orf201Q7Z4U5 140 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 SBSPONQ8IVN8 264 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 DHRSXQ8N5I4 330 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 PACRGLQ8N7B6 248 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 CASTOR1Q8WTX7 329 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 RCHY1Q96PM5 261 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 FBXL15Q9H469 300 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 C8orf4Q9NR00 106 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 A3GALT2U3KPV4 340 aa14.24□□□□□ -0.13
HDAC6-231ENST00000488905 IGHV4OR15-8A0A075B7B6 117 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 A0A087WW49 117 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 RRHO14718 337 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 RAB29O14966 203 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 NAPSAO96009 420 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 SPNP16150 400 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 CX3CL1P78423 397 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 INSL4Q14641 139 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 RPL39P5Q59GN2 51 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 LAIR2Q6ISS4 152 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 MUC7Q8TAX7 377 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 NICN1Q9BSH3 213 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 FAAP24Q9BTP7 215 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 SLC23A1Q9UHI7 598 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 PSORS1C1Q9UIG5 152 aa14.23□□□□□ -0.13
HDAC6-231ENST00000488905 TENM2Q9NT68 2774 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 H0YJW9 148 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 GNAO1P09471 354 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 CT45A6P0DMU7 189 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 CT45A5P0DMU8 189 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 CT45A7P0DMV0 189 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 GP9P14770 177 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 RBM48Q5RL73 367 aaKnown RBP14.22□□□□□ -0.13
HDAC6-231ENST00000488905 PYHIN1Q6K0P9 492 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 ACSM6Q6P461 480 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 ZNF880Q6PDB4 577 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 GLDNQ6ZMI3 551 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-231ENST00000488905 MOB1BQ7L9L4 216 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 C8orf59Q8N0T1 100 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-231ENST00000488905 OR6Q1Q8NGQ2 317 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 ABHD5Q8WTS1 349 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 ARPC1AQ92747 370 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 TM2D1Q9BX74 207 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 PARP12Q9H0J9 701 aaKnown RBP14.22□□□□□ -0.13
HDAC6-231ENST00000488905 KCNK15Q9H427 330 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 CHMP1AQ9HD42 196 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-231ENST00000488905 TPSG1Q9NRR2 321 aa14.22□□□□□ -0.13
HDAC6-231ENST00000488905 OR8U9P0C7N5 309 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 FRMD6-AS1P0C7T7 363 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 HTR2CP28335 458 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 UNC119Q13432 240 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 ACSM3Q53FZ2 586 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 C1orf100Q5SVJ3 147 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 CASC10Q5T4H9 136 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 GLT8D1Q68CQ7 371 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 CD200R1LQ6Q8B3 271 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 OVCH2Q7RTZ1 564 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 LRRTM1Q86UE6 522 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 NANOGP1Q8N7R0 232 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 KCNG3Q8TAE7 436 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 ABHD14BQ96IU4 210 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 GHITMQ9H3K2 345 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 WASHC3Q9Y3C0 194 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 NUBP2Q9Y5Y2 271 aa14.21□□□□□ -0.13
HDAC6-231ENST00000488905 H7C2Y5 167 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 FCN1O00602 326 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 RBBP9O75884 186 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 GSTP1P09211 210 aaKnown RBP14.2□□□□□ -0.14
HDAC6-231ENST00000488905 EGR2P11161 476 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-231ENST00000488905 MC5RP33032 325 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 PITPNAQ00169 270 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 TMEM267Q0VDI3 215 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-231ENST00000488905 ACTBL2Q562R1 376 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 PPP1R27Q86WC6 154 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 OR5AN1Q8NGI8 311 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 SETD6Q8TBK2 473 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 FBLIM1Q8WUP2 373 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 PHYHIPQ92561 330 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 AGMATQ9BSE5 352 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 FAM103A1Q9BTL3 118 aaKnown RBP14.2□□□□□ -0.14
HDAC6-231ENST00000488905 PLCXD1Q9NUJ7 323 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 RNF150Q9ULK6 438 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 GAB2Q9UQC2 676 aa14.2□□□□□ -0.14
HDAC6-231ENST00000488905 DNAH1Q9P2D7 4330 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 TRIM64CA6NLI5 447 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 TMEM14DPA8MWL7 114 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 ITGB1BP1O14713 200 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 IGHV3-11P01762 117 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 UNQ5815/PRO19632Q6UWF5 114 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 MS4A15Q8N5U1 240 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 BPIFB6Q8NFQ5 453 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 TMED9Q9BVK6 235 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 PLEKHJ1Q9NW61 149 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms