RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 OR5H14A6NHG9 310 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 PRSS29PA6NIE9 313 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 J3QLW9 94 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 YPEL1O60688 119 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 RBBP9O75884 186 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 SAA2P0DJI9 122 aaPredicted RBP6.92□□□□□ -1.3
COL17A1-207ENST00000488320 FOLR2P14207 255 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF19P17023 458 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 CCR9P51686 369 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 RPS16P62249 146 aaKnown RBP6.92□□□□□ -1.3
COL17A1-207ENST00000488320 EFNB1P98172 346 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 ANKRD55Q3KP44 614 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 ASCL4Q6XD76 172 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 Q6ZWC4 215 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 C2CD4CQ8TF44 421 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 TSEN15Q8WW01 171 aaKnown RBP6.92□□□□□ -1.3
COL17A1-207ENST00000488320 THRSPQ92748 146 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 GHSRQ92847 366 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 PELI1Q96FA3 418 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 YPEL2Q96QA6 119 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 RNF5Q99942 180 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 TINAGL1Q9GZM7 467 aaPredicted RBP6.92□□□□□ -1.3
COL17A1-207ENST00000488320 SPACA1Q9HBV2 294 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 PAK1IP1Q9NWT1 392 aaPredicted RBP6.92□□□□□ -1.3
COL17A1-207ENST00000488320 PIPOXQ9P0Z9 390 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 JPT1Q9UK76 154 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 DAPL1A0PJW8 107 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 OR4C45A6NMZ5 311 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 UBE2CO00762 179 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 MAS1P04201 325 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 CT45A6P0DMU7 189 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 CT45A5P0DMU8 189 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 CT45A7P0DMV0 189 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 EPHA2P29317 976 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 DAPP51397 102 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 TCTAP57738 103 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 NANOS2P60321 138 aaKnown RBP6.91□□□□□ -1.3
COL17A1-207ENST00000488320 RBMS2Q15434 407 aaKnown RBP6.91□□□□□ -1.3
COL17A1-207ENST00000488320 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 NHLRC3Q5JS37 347 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 FDX2Q6P4F2 183 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 PARP16Q8N5Y8 322 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 OR51A2Q8NGJ7 313 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 TMEM68Q96MH6 324 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 TSNAXQ99598 290 aaKnown RBP6.91□□□□□ -1.3
COL17A1-207ENST00000488320 PHB2Q99623 299 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 ZC4H2Q9NQZ6 224 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 MBNL3Q9NUK0 354 aaKnown RBP6.91□□□□□ -1.3
COL17A1-207ENST00000488320 ARL8BQ9NVJ2 186 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 WASHC3Q9Y3C0 194 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 PEX16Q9Y5Y5 336 aa6.91□□□□□ -1.3
COL17A1-207ENST00000488320 UBE2QL1A1L167 161 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 MSGN1A6NI15 193 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ZAR1LA6NP61 321 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 IGLL5B9A064 214 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 H0YJW9 148 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 RAB29O14966 203 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 SLC16A6O15403 523 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ST8SIA5O15466 376 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 SNX3O60493 162 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF780AO75290 641 aaPredicted RBP6.9□□□□□ -1.3
COL17A1-207ENST00000488320 SCAF4O95104 1147 aaKnown RBP6.9□□□□□ -1.3
COL17A1-207ENST00000488320 RPSAP08865 295 aaKnown RBP6.9□□□□□ -1.3
COL17A1-207ENST00000488320 GTF2F2P13984 249 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 CPEP16870 476 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 EDN2P20800 178 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF93P35789 620 aaPredicted RBP6.9□□□□□ -1.3
COL17A1-207ENST00000488320 HTD2P86397 168 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 SLC22A6Q4U2R8 563 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF57Q68EA5 555 aaPredicted RBP6.9□□□□□ -1.3
COL17A1-207ENST00000488320 C12orf73Q69YU5 71 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 RAB12Q6IQ22 244 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ADGRG5Q8IZF4 528 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ARHGAP24Q8N264 748 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 C11orf45Q8TAV5 145 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 CANT1Q8WVQ1 401 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 RFKQ969G6 155 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 GALMQ96C23 342 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 ALG8Q9BVK2 526 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 MFFQ9GZY8 342 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 IL36GQ9NZH8 169 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 STEAP1Q9UHE8 339 aa6.9□□□□□ -1.3
COL17A1-207ENST00000488320 A0A1W2PP11 408 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 B2RBV5 119 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 BMPR1BO00238 502 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 TUSC2O75896 110 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 APELAP0DMC3 54 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 T-ENOLP0DO92 83 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 SOX2P48431 317 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 ATP5G2Q06055 141 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 TMED1Q13445 227 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 RIPK1Q13546 671 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 OR5AK2Q8NH90 309 aa6.89□□□□□ -1.31
COL17A1-207ENST00000488320 IL1F10Q8WWZ1 152 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms