RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 RBFOX2O43251 390 aaKnown RBP eCLIP4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 TRAF3IP2O43734 574 aaPredicted RBP4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 S1PR2O95136 353 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 VAMP5O95183 116 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 SLC35E2P0CK97 266 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 SLC25A6P12236 298 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 OR1D2P34982 312 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 CEACAM3P40198 252 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 PRRX1P54821 245 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 CLDN15P56746 228 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 ID2Q02363 134 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 PAX2Q02962 417 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 FAM110CQ1W6H9 321 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 LRRC75BQ2VPJ9 315 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 TMEM52BQ4KMG9 183 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 TSPO2Q5TGU0 170 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 OTPQ5XKR4 325 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 DNM1P34Q6PK57 102 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 C19orf35Q6ZS72 473 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 OR4N2Q8NGD1 307 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 FAM216AQ8WUB2 273 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 C11orf40Q8WZ69 217 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 TIMM29Q9BSF4 260 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 VSIRQ9H7M9 311 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 TMEM74BQ9NUR3 256 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 FAM30AQ9NZY2 134 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 JKAMPQ9P055 326 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 PILRAQ9UKJ1 303 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 TBL2Q9Y4P3 447 aaKnown RBP4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 SPACA6W5XKT8 324 aa4.03□□□□□ -1.77
CDC42BPA-213ENST00000488131 FREM3P0C091 2139 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 TRAV9-2A0A087WT02 112 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 PIGBOS1A0A0B4J2F0 54 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 C3orf85A0A1B0GTC6 90 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 CTXND1A0A1B0GTU2 59 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 A0A1B0GV72 72 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 GAGE12BA1L429 117 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 SHISA7A6NL88 538 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 AQP7P3A6NL99 342 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 E9PLN8 166 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 SLC33A1O00400 549 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 MPPED1O15442 326 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 NUDT14O95848 222 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 HLA-DRB1P01911 266 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 MT-ND6P03923 174 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 IGLC1P0CG04 106 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 PPIAL4GP0DN37 164 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 ZNF823P16415 610 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 ZNF17P17021 662 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 VDAC1P21796 283 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 OR1D5P58170 312 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 KRTDAPP60985 99 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 RPS16P62249 146 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 POU3F1Q03052 451 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 OR8B8Q15620 311 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 CLEC12BQ2HXU8 276 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 TMEM249Q2WGJ8 235 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 DEFB134Q4QY38 66 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 PHLDA2Q53GA4 152 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 CXorf66Q5JRM2 361 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 PRAMEF20Q5VT98 475 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 TMEM215Q68D42 235 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 UFSP1Q6NVU6 142 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 KLHL24Q6TFL4 600 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 Q6ZSR3 168 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 VASH2Q86V25 355 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 SELENOHQ8IZQ5 122 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 ZNF525Q8N782 197 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 BCORP1Q8N888 145 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 OR4C3Q8NH37 302 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 ASB10Q8WXI3 467 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 LHX4Q969G2 390 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 FOXN4Q96NZ1 517 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 OR2A5Q96R48 311 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 RAB40CQ96S21 281 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 VKORC1Q9BQB6 163 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 RSG1Q9BU20 258 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 SFXN3Q9BWM7 321 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 RBM24Q9BX46 236 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 STRADBQ9C0K7 418 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 FAM60AQ9NP50 221 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 NRN1Q9NPD7 142 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 DOCK8Q8NF50 2099 aa4.02□□□□□ -1.77
CDC42BPA-213ENST00000488131 CACNA1IQ9P0X4 2223 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 TRAV34A0A0B4J273 112 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 A0A1W2PNV4 684 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 DPRXA6NFQ7 191 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 GJE1A6NN92 205 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 B4DGG1 531 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 B5MCH6 92 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 H0YJW9 148 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 SH2D1BO14796 132 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 DEGS1O15121 323 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 ADAM20O43506 726 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 PDE6DO43924 150 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 DUSP11O75319 330 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 ZNF324O75467 553 aaPredicted RBP4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 MPZL1O95297 269 aa4.01□□□□□ -1.77
CDC42BPA-213ENST00000488131 IGLV3-1P01715 115 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms