RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 HKR1P10072 659 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 CEACAM3P40198 252 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 KIR2DS4P43632 304 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 ZNF816Q0VGE8 651 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 HABP2Q14520 560 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 KIR2DS1Q14954 304 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 AANATQ16613 207 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 Q3ZCU0 254 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 H1FOOQ8IZA3 346 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 MCFD2Q8NI22 146 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 NXF2Q9GZY0 626 aaKnown RBP13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 ANXA10Q9UJ72 324 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 MGAT4AQ9UM21 535 aa13.72□□□□□ -0.21
SHROOM1-205ENST00000488072 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 FAM90A9PA6NNJ1 464 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 RGS11O94810 467 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 IGKV1D-33P01593 117 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 IGKV1-33P01594 117 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 PRSS3P35030 304 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 DYNLT3P51808 116 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 ZNF137PP52743 207 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 BLCAPP62952 87 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 PITPNAQ00169 270 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 SRSF7Q16629 238 aaKnown RBP eCLIP13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 LY6G6FQ5SQ64 297 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 ZNF833PQ6ZTB9 187 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 GPX8Q8TED1 209 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 ZFAND2BQ8WV99 257 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 NABP2Q9BQ15 211 aa13.71□□□□□ -0.21
SHROOM1-205ENST00000488072 TMEM89A2RUT3 159 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 POM121CA8CG34 1229 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 PMP2P02689 132 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 CT45A6P0DMU7 189 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 CT45A5P0DMU8 189 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 CT45A7P0DMV0 189 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 RAB7AP51149 207 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 SRSF4Q08170 494 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 HES1Q14469 280 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 DHRS7BQ6IAN0 325 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 LYSMD2Q8IV50 215 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 OR52I2Q8NH67 350 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 OR10J5Q8NHC4 309 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 GINS4Q9BRT9 223 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
SHROOM1-205ENST00000488072 SMIM31A0A1B0GVY4 71 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 OOSP1A8MZH6 123 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 LANCL1O43813 399 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 AMY1AP04745 511 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 AMY2AP04746 511 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 IL3RAP26951 378 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 CNTFRP26992 372 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 HLA-DMAP28067 261 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 BRS3P32247 399 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 TNFSF8P32971 234 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 RFX2P48378 723 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 RAG2P55895 527 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 KRTAP10-3P60369 221 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 DGCR2P98153 550 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 TMEM95Q3KNT9 176 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 AWAT1Q58HT5 328 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 EAF1Q96JC9 268 aaPredicted RBP13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 GPHA2Q96T91 129 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 SLC25A33Q9BSK2 321 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 TOLLIPQ9H0E2 274 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 OR2D2Q9H210 308 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 IFT46Q9NQC8 304 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
SHROOM1-205ENST00000488072 CRYBA1P05813 215 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 AADACP22760 399 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 ARPC4P59998 168 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 CCDC144NLQ6NUI1 221 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 OR8H3Q8N146 312 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 DIRAS2Q96HU8 199 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 ZNF702PQ9H963 129 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 SDHAF2Q9NX18 166 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 KLK11Q9UBX7 282 aa13.68□□□□□ -0.22
SHROOM1-205ENST00000488072 ITGB1BP1O14713 200 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 TMEM11P17152 192 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 FCGR2CP31995 323 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 GPR12P47775 334 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 LSAMPQ13449 338 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 ZNF383Q8NA42 475 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 LINC01006Q8NI28 216 aa13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 RBM14Q96PK6 669 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-205ENST00000488072 ZNF701M0R085 212 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 M0R1X1 148 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 RAB29O14966 203 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 TUSC2O75896 110 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 IGLV2-14P01704 120 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 LPLP06858 475 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 NAT1P18440 290 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 F2RL1P55085 397 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 FAM131AQ6UXB0 335 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 Q8N6K4 173 aa13.66□□□□□ -0.22
SHROOM1-205ENST00000488072 EDARADDQ8WWZ3 215 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms