RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 GABARAPO95166 117 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 CLIC3O95833 236 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 CYB5AP00167 134 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 IGKV1D-12P01611 117 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ZNF44P15621 663 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ATF1P18846 271 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ATP6V1E1P36543 226 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ARHGDIBP52566 201 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 EFNB1P98172 346 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 HNF4GQ14541 408 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ATXN7L3Q14CW9 347 aaPredicted RBP4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 LTC4SQ16873 150 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 TPTE2P1Q5T6R2 138 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 HES5Q5TA89 166 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 SLC16A12Q6ZSM3 486 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 C16orf82Q7Z2V1 217 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 FAM220AQ7Z4H9 259 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 Q8IYB0 196 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ENTHD1Q8IYW4 607 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 TCTE3Q8IZS6 198 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ZNF680Q8NEM1 530 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 OR10AC1Q8NH08 325 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 ZNF596Q8TC21 504 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 FGGYQ96C11 551 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 AKR1E2Q96JD6 320 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 NOL4LQ96MY1 436 aaPredicted RBP4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 DUX3Q96PT4 197 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 CCDC32Q9BV29 185 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 PPIL3Q9H2H8 161 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 GAL3ST2Q9H3Q3 398 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 RIBC2Q9H4K1 309 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 EXOSC4Q9NPD3 245 aaKnown RBP4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 NBEAL2Q6ZNJ1 2754 aa4.99□□□□□ -1.61
TNFSF4-203ENST00000488053 TRAV39A0A0B4J263 110 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 A0A1W2PPE3 182 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 ODAMA1E959 279 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 PSMB11A5LHX3 300 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 E9PQ18 207 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 F8W036 122 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 BUB1B-PAK6H3BSN5 160 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 I3L521 148 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 IGLV1-47P01700 117 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 SNRNP70P08621 437 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR2T7P0C7T2 308 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 UBCP0CG48 685 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HOXB6P17509 224 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 FASP25445 335 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HTR1FP30939 366 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 POLR2IP36954 125 aaKnown RBP4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 PTGFRP43088 359 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 GLP1RP43220 463 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 GNG10P50151 68 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 IFITM3Q01628 133 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 BDH1Q02338 343 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 ZNF85Q03923 595 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 PDZK1IP1Q13113 114 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 DIAPH2-AS1Q14236 149 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HES1Q14469 280 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 ZNF146Q15072 292 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 C17orf58Q2M2W7 97 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HLA-DRB5Q30154 266 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 KRBOX4Q5JUW0 171 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 SPIN3Q5JUX0 258 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 TTC23Q5W5X9 447 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 KDM4DQ6B0I6 523 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR52W1Q6IF63 320 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HEPN1Q6WQI6 88 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 RTN4RL2Q86UN3 420 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OSR2Q8N2R0 312 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 STX19Q8N4C7 294 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 DRAM1Q8N682 238 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR4D6Q8NGJ1 314 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR51A4Q8NGJ6 313 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR13C3Q8NGS6 347 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR13C9Q8NGT0 318 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 OR56B4Q8NH76 319 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 MCFD2Q8NI22 146 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 DEDD2Q8WXF8 326 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 PP6455Q8WZ26 134 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 LEAP2Q969E1 77 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 TOMM40LQ969M1 308 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 COQ2Q96H96 371 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 ST6GAL2Q96JF0 529 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 RDH12Q96NR8 316 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 FUNDC2Q9BWH2 189 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HHLA2Q9UM44 414 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 MOB4Q9Y3A3 225 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 CBY1Q9Y3M2 126 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 PEX16Q9Y5Y5 336 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 HSPE1-MOB4S4R3N1 261 aa4.98□□□□□ -1.61
TNFSF4-203ENST00000488053 RPS10-NUDT3A0A1W2PQS6 291 aa4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 LY6LH3BQJ8 138 aa4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 WRBO00258 174 aa4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 SLC33A1O00400 549 aaPredicted RBP4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 DEGS1O15121 323 aa4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 RGS5O15539 181 aa4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 KDM4BO94953 1096 aa4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 DUS4LO95620 317 aaKnown RBP4.97□□□□□ -1.61
TNFSF4-203ENST00000488053 C1QBP02746 253 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms