RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ZNF664Q8N3J9 261 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 TMEM170AQ8WVE7 144 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 ACY3Q96HD9 319 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 NOL4LQ96MY1 436 aaPredicted RBP10.32□□□□□ -0.76
COL3A1-206ENST00000487010 C2orf88Q9BSF0 95 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PCGF1Q9BSM1 259 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PARLQ9H300 379 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 OR51I2Q9H344 312 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 CTXND1A0A1B0GTU2 59 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
COL3A1-206ENST00000487010 WDR1O75083 606 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 CLDN1O95832 211 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 HRASP01112 189 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 GCGP01275 180 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 CEACAM6P40199 344 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 CYB561P49447 251 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
COL3A1-206ENST00000487010 TNFRSF9Q07011 255 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 Q3ZCU0 254 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 ZNF497Q6ZNH5 498 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 DMRTC2Q8IXT2 367 aaPredicted RBP10.31□□□□□ -0.76
COL3A1-206ENST00000487010 DRAM1Q8N682 238 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 ELOVL1Q9BW60 279 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 SLC25A22Q9H936 323 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 TRAPPC2LQ9UL33 140 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 ESPL1Q14674 2120 aa10.31□□□□□ -0.76
COL3A1-206ENST00000487010 NUBP1P53384 320 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 TLE1Q04724 770 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 HNF4GQ14541 408 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 RTP5Q14D33 572 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 ATP6V1FQ16864 119 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 ANAPC16Q96DE5 110 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 MANBALQ9NQG1 85 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 PILRBQ9UKJ0 227 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 WDFY3Q8IZQ1 3526 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 A0A1W2PR80 420 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 J3QT63 122 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 ST8SIA5O15466 376 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 MBP02144 154 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 HOXA6P31267 233 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 WNT5AP41221 380 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 LHX2P50458 406 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 PLP2Q04941 152 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 IGFBP7Q16270 282 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 OR10G9Q8NGN4 311 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 OR10G7Q8NGN6 311 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 OR4F5Q8NH21 305 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 UBALD1Q8TB05 177 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 GATAD1Q8WUU5 269 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 OR4F4Q96R69 305 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 HSPB7Q9UBY9 170 aa10.3□□□□□ -0.76
COL3A1-206ENST00000487010 BOKQ9UMX3 212 aaPredicted RBP10.3□□□□□ -0.76
COL3A1-206ENST00000487010 A0A1W2PPQ1 181 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 RNF212BA8MTL3 300 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 SIRPB1O00241 398 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 GGCTO75223 188 aaKnown RBP10.29□□□□□ -0.76
COL3A1-206ENST00000487010 OR2H2O95918 312 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 GYPAP02724 150 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 SELLP14151 372 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 CA6P23280 308 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 CLEC12BQ2HXU8 276 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 ACTL10Q5JWF8 245 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 MYPOPQ86VE0 399 aaPredicted RBP10.29□□□□□ -0.76
COL3A1-206ENST00000487010 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 ZNF705GA8MUZ8 300 aaPredicted RBP10.29□□□□□ -0.76
COL3A1-206ENST00000487010 SYNGR4O95473 234 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 FOSL1P15407 271 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 SRP14P37108 136 aaKnown RBP10.29□□□□□ -0.76
COL3A1-206ENST00000487010 IDH3GP51553 393 aaPredicted RBP10.29□□□□□ -0.76
COL3A1-206ENST00000487010 CLDN18P56856 261 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 FFAR4Q5NUL3 377 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 SPINK14Q6IE38 97 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 BEND2Q8NDZ0 799 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 OR2T10Q8NGZ9 312 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 TMEM37Q8WXS4 190 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 OR51B6Q9H340 312 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
COL3A1-206ENST00000487010 FUT9Q9Y231 359 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 TP53TG5Q9Y2B4 290 aa10.29□□□□□ -0.76
COL3A1-206ENST00000487010 WDR87Q6ZQQ6 2873 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 PMS2P5A8MQ11 134 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 IL18BPO95998 194 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 TYMSP04818 313 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 CFIP05156 583 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 CELA3AP09093 270 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 MSMO1Q15800 293 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 ACOT6Q3I5F7 207 aaPredicted RBP10.28□□□□□ -0.76
COL3A1-206ENST00000487010 PMS2CLQ68D20 193 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 CISD2Q8N5K1 135 aaKnown RBP10.28□□□□□ -0.76
COL3A1-206ENST00000487010 APH1AQ96BI3 265 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
COL3A1-206ENST00000487010 OR6C3Q9NZP0 311 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 SIT1Q9Y3P8 196 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 WIPI2Q9Y4P8 454 aa10.28□□□□□ -0.76
COL3A1-206ENST00000487010 PCSK5Q92824 1860 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms