RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TMEM200BQ69YZ2 307 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 C11orf87Q6NUJ2 197 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 TRAT1Q6PIZ9 186 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 CLEC2AQ6UVW9 174 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 TMUB2Q71RG4 321 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 ZNF546Q86UE3 836 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 SLC38A6Q8IZM9 456 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 LY6G5BQ8NDX9 201 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 UBALD1Q8TB05 177 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 CASTOR1Q8WTX7 329 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 KIRREL1Q96J84 757 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 RTBDNQ9BSG5 229 aaPredicted RBP9.32□□□□□ -0.92
SND1-212ENST00000485871 MFFQ9GZY8 342 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 NARFLQ9H6Q4 476 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 TAS2R3Q9NYW6 316 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 LPAR3Q9UBY5 353 aa9.32□□□□□ -0.92
SND1-212ENST00000485871 UBE2J1Q9Y385 318 aaPredicted RBP9.32□□□□□ -0.92
SND1-212ENST00000485871 hADV38S2A0JD32 116 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 LINC00862A6NCI5 91 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 C5orf51A6NDU8 294 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 ZNF729A6NN14 1252 aaPredicted RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 B3GALNT1O75752 331 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 ZNF728P0DKX0 622 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 GZMHP20718 246 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 LOXL3P58215 753 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 HERV-K104P61576 105 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 RPL31P62899 125 aaKnown RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 UBA52P62987 128 aaKnown RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 SRPXP78539 464 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 PAX2Q02962 417 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 CLEC12BQ2HXU8 276 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 ABCA11PQ4W5N1 156 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 ESCO2Q56NI9 601 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 CLLU1Q5K131 121 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 FAM53AQ6NSI3 398 aaPredicted RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 KCTD9Q7L273 389 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 LDLRAD3Q86YD5 345 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 H1FOOQ8IZA3 346 aaPredicted RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 C11orf42Q8N5U0 333 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 MOB3AQ96BX8 217 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 GALNT14Q96FL9 552 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 SSBP3Q9BWW4 388 aaPredicted RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 SUCNR1Q9BXA5 334 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 ZFP57Q9NU63 452 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 OR1A1Q9P1Q5 309 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
SND1-212ENST00000485871 PCDHB10Q9UN67 800 aa9.31□□□□□ -0.92
SND1-212ENST00000485871 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 TRGV10A0A0A0MS01 117 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 TRAV14DV4A0A0A6YYC5 116 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 KBTBD11-OT1A0A1B0GTJ5 212 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 CRYM-AS1A6NIL9 109 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 C17orf98A8MV24 154 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 PHF1O43189 567 aaPredicted RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 MMP23AO75900 390 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 IFNA21P01568 189 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 CCL3L1P16619 93 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 PSMB6P28072 239 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 IL2RGP31785 369 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 NUP62P37198 522 aaPredicted RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 GNB2P62879 340 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 HTD2P86397 168 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 EXOSC2Q13868 293 aaKnown RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 GNMTQ14749 295 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 UTF1Q5T230 341 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 ACOT7LQ6ZUV0 252 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 KCNRGQ8N5I3 272 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 ZNF565Q8N9K5 539 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 INO80EQ8NBZ0 244 aaPredicted RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 PPP1R1CQ8WVI7 109 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 H1FXQ92522 213 aaKnown RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 ARL11Q969Q4 196 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 C2orf50Q96LR7 162 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 PARP12Q9H0J9 701 aaKnown RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 GSX1Q9H4S2 264 aaPredicted RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 KCNIP1Q9NZI2 227 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 TNFSF18Q9UNG2 199 aa9.3□□□□□ -0.92
SND1-212ENST00000485871 POLR3KQ9Y2Y1 108 aaPredicted RBP9.3□□□□□ -0.92
SND1-212ENST00000485871 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
SND1-212ENST00000485871 FAM25EA8MYX2 175 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 FAM157AC9JC47 383 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 BET1O15155 118 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 MPC2O95563 127 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 PPYP01298 95 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 SLC25A16P16260 332 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 AADACP22760 399 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 ZFP36P26651 326 aaKnown RBP9.29□□□□□ -0.92
SND1-212ENST00000485871 S100GP29377 79 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 FCGR2CP31995 323 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 ERVFRD-1P60508 538 aa9.29□□□□□ -0.92
SND1-212ENST00000485871 SUPT4H1P63272 117 aaKnown RBP9.29□□□□□ -0.92
SND1-212ENST00000485871 PRSS57Q6UWY2 283 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms