RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MDKP21741 143 aaPredicted RBP9.5□□□□□ -0.89
HPS4-214ENST00000485842 ZNF137PP52743 207 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 ARPC4P59998 168 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 FOXL1Q12952 345 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 SRSF7Q16629 238 aaKnown RBP eCLIP9.5□□□□□ -0.89
HPS4-214ENST00000485842 AWAT1Q58HT5 328 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 RPL39P5Q59GN2 51 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 C12orf54Q6X4T0 127 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 Q6ZSV7 163 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 SNX29P2Q8IUI4 249 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 ODF3L1Q8IXM7 274 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 BEST4Q8NFU0 473 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 OR4C13Q8NGP0 309 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 OR4F5Q8NH21 305 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 ST6GALNAC6Q969X2 333 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 RBM38Q9H0Z9 239 aaKnown RBP9.5□□□□□ -0.89
HPS4-214ENST00000485842 RSL24D1Q9UHA3 163 aaKnown RBP9.5□□□□□ -0.89
HPS4-214ENST00000485842 RNF150Q9ULK6 438 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 CTDSP2O14595 271 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 NDUFA7O95182 113 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 DIRAS3O95661 229 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 TMEM11P17152 192 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 PRSS3P35030 304 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 CBX5P45973 191 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 GPR12P47775 334 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 HNF4GQ14541 408 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 RNASE12Q5GAN4 147 aaKnown RBP9.49□□□□□ -0.89
HPS4-214ENST00000485842 CNIH2Q6PI25 160 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 HOGA1Q86XE5 327 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 LAX1Q8IWV1 398 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 S1PR3Q99500 378 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 SLC25A33Q9BSK2 321 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 DCUN1D5Q9BTE7 237 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 MRPL20Q9BYC9 149 aaKnown RBP9.49□□□□□ -0.89
HPS4-214ENST00000485842 C6orf62Q9GZU0 229 aaPredicted RBP9.49□□□□□ -0.89
HPS4-214ENST00000485842 MIXL1Q9H2W2 232 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 PIPOXQ9P0Z9 390 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 EXTL2Q9UBQ6 330 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 ANXA10Q9UJ72 324 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 ZNF221Q9UK13 617 aa9.49□□□□□ -0.89
HPS4-214ENST00000485842 RBM7Q9Y580 266 aaKnown RBP9.49□□□□□ -0.89
HPS4-214ENST00000485842 FAM90A9PA6NNJ1 464 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 ZNF736B4DX44 427 aaPredicted RBP9.48□□□□□ -0.89
HPS4-214ENST00000485842 J3QRK9 145 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 ITGB1BP1O14713 200 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 RAB29O14966 203 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 OR2F2O95006 317 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 HLA-DQB1P01920 261 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 CTXN2P0C2S0 81 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 OR8U9P0C7N5 309 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 NFYAP23511 347 aaPredicted RBP9.48□□□□□ -0.89
HPS4-214ENST00000485842 LSAMPQ13449 338 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 ARSJQ5FYB0 599 aaPredicted RBP9.48□□□□□ -0.89
HPS4-214ENST00000485842 ZNF833PQ6ZTB9 187 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 H1FOOQ8IZA3 346 aaPredicted RBP9.48□□□□□ -0.89
HPS4-214ENST00000485842 OR8U1Q8NH10 309 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 RBMXL1Q96E39 390 aaKnown RBP9.48□□□□□ -0.89
HPS4-214ENST00000485842 AKR1E2Q96JD6 320 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 AGMATQ9BSE5 352 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 OR2D2Q9H210 308 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 BEX1Q9HBH7 125 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 ADAM30Q9UKF2 790 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 SIGLEC9Q9Y336 463 aa9.48□□□□□ -0.89
HPS4-214ENST00000485842 CD1BP29016 333 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 COMPP49747 757 aaPredicted RBP9.47□□□□□ -0.89
HPS4-214ENST00000485842 HABP2Q14520 560 aaPredicted RBP9.47□□□□□ -0.89
HPS4-214ENST00000485842 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 C16orf82Q7Z2V1 217 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 THNSL2Q86YJ6 484 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 OR2T10Q8NGZ9 312 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 MCFD2Q8NI22 146 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 LINC01006Q8NI28 216 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 RBM14Q96PK6 669 aaKnown RBP9.47□□□□□ -0.89
HPS4-214ENST00000485842 NABP2Q9BQ15 211 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 ZNF251Q9BRH9 671 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 SLIRPQ9GZT3 109 aaKnown RBP9.47□□□□□ -0.89
HPS4-214ENST00000485842 TOLLIPQ9H0E2 274 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 RANBP3Q9H6Z4 567 aaPredicted RBP9.47□□□□□ -0.89
HPS4-214ENST00000485842 MOB4Q9Y3A3 225 aa9.47□□□□□ -0.89
HPS4-214ENST00000485842 CLPSL1A2RUU4 121 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 SH2D7A6NKC9 451 aaPredicted RBP9.46□□□□□ -0.9
HPS4-214ENST00000485842 M0R1X1 148 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 TSPAN9O75954 239 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 FAM131AQ6UXB0 335 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 GLDNQ6ZMI3 551 aaPredicted RBP9.46□□□□□ -0.9
HPS4-214ENST00000485842 C3orf56Q8N813 242 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 OR2T6Q8NHC8 308 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 GPX8Q8TED1 209 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
HPS4-214ENST00000485842 GHITMQ9H3K2 345 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 ZNF702PQ9H963 129 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 SCPEP1Q9HB40 452 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 NECAP2Q9NVZ3 263 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 RNF114Q9Y508 228 aa9.46□□□□□ -0.9
HPS4-214ENST00000485842 A0A1B0GUS0 222 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms