RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 HBG1P69891 147 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 HBG2P69892 147 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 MXD1Q05195 221 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 RIGQ13278 110 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 C1DQ13901 141 aaKnown RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 FZD2Q14332 565 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 IHHQ14623 411 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 TMEM187Q14656 261 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 SIX1Q15475 284 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 CD226Q15762 336 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 FAM106AQ4KMX7 169 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 UNC50Q53HI1 259 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 ATP1A1-AS1Q5TC04 95 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 CGB2Q6NT52 195 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 APOOLQ6UXV4 268 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 IL34Q6ZMJ4 242 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 C9orf139Q6ZV77 190 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 P2RY8Q86VZ1 359 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 PPP1R27Q86WC6 154 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 HOGA1Q86XE5 327 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 CBLN2Q8IUK8 224 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 ZNF564Q8TBZ8 553 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 CT55Q8WUE5 264 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 C10orf82Q8WW14 230 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 S100ZQ8WXG8 99 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 GPR146Q96CH1 333 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 BTN2A3PQ96KV6 586 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 AP1S3Q96PC3 154 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 OR52B2Q96RD2 323 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 LYSMD1Q96S90 227 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 NRIP2Q9BQI9 281 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 SAMD10Q9BYL1 202 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 CHST6Q9GZX3 395 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 RNASE7Q9H1E1 156 aaKnown RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 C20orf85Q9H1P6 137 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 MOB1AQ9H8S9 216 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 NOX3Q9HBY0 568 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 TMEM9BQ9NQ34 198 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 NUDT4Q9NZJ9 180 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 MRPL27Q9P0M9 148 aaKnown RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 NAT8Q9UHE5 227 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 HIGD1AQ9Y241 93 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 UBIAD1Q9Y5Z9 338 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 AKAP11Q9UKA4 1901 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 COL5A2P05997 1499 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 ADAMTSL3P82987 1691 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 IGLV5-37A0A075B6J1 123 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 IGLV3-22A0A075B6J6 115 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 A0A1B0GVT2 93 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 DUXBA0A1W2PPF3 345 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 DNAJC9-AS1A6NH13 148 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 RIIAD1A6NNX1 92 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SAP18O00422 153 aaKnown RBP3.66□□□□□ -1.82
RTN4-213ENST00000485749 OR2A4O95047 310 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SERPINE1P05121 402 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 HLA-DQB2P05538 268 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 CD2P06729 351 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 CELA2AP08217 269 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SOD3P08294 240 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 AKAIN1P0CW23 69 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 T-ENOLP0DO92 83 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TDGF1P13385 188 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 CPMP14384 443 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 LIFP15018 202 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SPNP16150 400 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 CXCL2P19875 107 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 RPS3P23396 243 aaKnown RBP eCLIP3.66□□□□□ -1.82
RTN4-213ENST00000485749 CNTFRP26992 372 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SRIP30626 198 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 ETV6P41212 452 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 GUCA1AP43080 201 aaPredicted RBP3.66□□□□□ -1.82
RTN4-213ENST00000485749 KIR2DS2P43631 304 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 NOVP48745 357 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 LIM2P55344 173 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 H2BFSP57053 126 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 RND3P61587 244 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 FABP9Q0Z7S8 132 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TWIST1Q15672 202 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TMEM241Q24JQ0 296 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 ZNF404Q494X3 552 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TMEM255AQ5JRV8 349 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 NHLRC3Q5JS37 347 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SPANXN4Q5MJ08 99 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 FAM201AQ5SY85 155 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 ZNF626Q68DY1 528 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 PVRIGQ6DKI7 326 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 RASL11AQ6T310 242 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 IZUMO2Q6UXV1 221 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 FBXW12Q6X9E4 464 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 Q6ZN92 141 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 CDC20BQ86Y33 519 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 FBXL14Q8N1E6 418 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TMEM86AQ8N2M4 240 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TMEM229BQ8NBD8 167 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 ZNF114Q8NC26 417 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 OR1N2Q8NGR9 330 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 LCN9Q8WX39 176 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 PLEKHB2Q96CS7 222 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms