RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 RAB3AP20336 220 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 GLRXP35754 106 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 FHL1Q13642 323 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 OR2B11Q5JQS5 317 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 ATRAIDQ6UW56 229 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 Q6ZVH6 145 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 ANGPTL5Q86XS5 388 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 MUC15Q8N387 334 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 C12orf43Q96C57 262 aaKnown RBP4.33□□□□□ -1.72
CCDC39-205ENST00000485055 DCTN5Q9BTE1 182 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 C19orf73Q9NVV2 129 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 FAM206AQ9NX38 181 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 EXOSC1Q9Y3B2 195 aaKnown RBP4.33□□□□□ -1.72
CCDC39-205ENST00000485055 MPDZO75970 2070 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 NUDT14O95848 222 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 IFNA1P01562 189 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 IGHG4P01861 327 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 RLN2P04090 185 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 DAOP14920 347 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 SERPINB10P48595 397 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 ADAMTSL5Q6ZMM2 481 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 PRSS48Q7RTY5 328 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 PCNPQ8WW12 178 aaKnown RBP4.33□□□□□ -1.72
CCDC39-205ENST00000485055 CABLES2Q9BTV7 478 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 GGACTQ9BVM4 153 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 OR11A1Q9GZK7 315 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 SHARPINQ9H0F6 387 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 KLF12Q9Y4X4 402 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 DCHS2Q6V1P9 2916 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 CRYBG3Q68DQ2 2970 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 PKDREJQ9NTG1 2253 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 IGHV2OR16-5A0A0B4J2B6 119 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 LOC110117498-PIK3R3F6TDL0 507 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 K7EMT4 169 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 REG1AP05451 166 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 MMP7P09237 267 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 MYOD1P15172 320 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 MAKP20794 623 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ERP29P30040 261 aaKnown RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 GALR1P47211 349 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 UBE2E1P51965 193 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 DVL1P1P54792 670 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CKS1BP61024 79 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SELENOWP63302 87 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 PSG4Q00888 419 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 OR7A5Q15622 319 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 C6orf52Q5T4I8 152 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SAMD13Q5VXD3 122 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NANOGP8Q6NSW7 305 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF730Q6ZMV8 503 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 MRPL52Q86TS9 123 aaKnown RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 COMMD7Q86VX2 200 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NIT1Q86X76 327 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 VKORC1L1Q8N0U8 176 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 C10orf111Q8N326 155 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZFP41Q8N8Y5 198 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 OR8G5Q8NG78 346 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF519Q8TB69 540 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 DNAJC9Q8WXX5 260 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 LRRC58Q96CX6 371 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SLC25A44Q96H78 314 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 UBE2E2Q96LR5 201 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 EBF4Q9BQW3 602 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 THAP7Q9BT49 309 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 RBKSQ9H477 322 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NANOGQ9H9S0 305 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SAR1AQ9NR31 198 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 UGT2A1Q9Y4X1 527 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NBASA2RRP1 2371 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NAV2Q8IVL1 2488 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CCDC182A6NF36 153 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 C5orf58C9J3I9 102 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CYB5BO43169 146 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FOXH1O75593 365 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 DCTN3O75935 186 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FAM157CP0CG43 387 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CD164Q04900 197 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 RAB40BQ12829 278 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FAM27BQ5VT28 67 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 LEMD1Q68G75 181 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CGB2Q6NT52 195 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 C1QL4Q86Z23 238 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 OR9I1Q8NGQ6 314 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 OR13G1Q8NGZ3 307 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 GNPDA2Q8TDQ7 276 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NIPSNAP3BQ9BS92 247 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NIPAL2Q9H841 368 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NIT2Q9NQR4 276 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 BIN3Q9NQY0 253 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM38BQ9NVV0 291 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 RPS6KB2Q9UBS0 482 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 PSG8Q9UQ74 426 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FREM1Q5H8C1 2179 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ANK3Q12955 4377 aaKnown RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 IGHV3-15A0A0B4J1V0 119 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 H0YIZ8 118 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 TPST1O60507 370 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 LYZL6O75951 148 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FSHBP01225 129 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 IGHV3-13P01766 116 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms