RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 FAHD2AQ96GK7 314 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 AKR1E2Q96JD6 320 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 SCGB3A2Q96PL1 93 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 ZNF251Q9BRH9 671 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 SEC22CQ9BRL7 303 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 ABHD14AQ9BUJ0 271 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 SUCNR1Q9BXA5 334 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 OR2D2Q9H210 308 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 TMEM133Q9H2Q1 129 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 UNKLQ9H9P5 680 aaKnown RBP6.73□□□□□ -1.33
USP4-210ENST00000483212 SLC2A9Q9NRM0 540 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 PSG11Q9UQ72 335 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 INSIG2Q9Y5U4 225 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 KPTNQ9Y664 436 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 IGHV2-26A0A0B4J1V2 119 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 A0A1W2PPE3 182 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 C9orf170A2RU37 121 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 SNRPGP15A8MWD9 76 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 RNF223E7ERA6 249 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 HSD17B6O14756 317 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 PGLYRP1O75594 196 aaPredicted RBP6.72□□□□□ -1.33
USP4-210ENST00000483212 SFT2D2O95562 160 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 DHFRP00374 187 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 MSMBP08118 114 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 PRTN3P24158 256 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 GNG10P50151 68 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 ZNF137PP52743 207 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 PIGPP57054 158 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 TAS2R31P59538 309 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 ARF6P62330 175 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 PAX8Q06710 450 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 DHRS2Q13268 280 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 PHLDA2Q53GA4 152 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 TMEM128Q5BJH2 165 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 ZNF626Q68DY1 528 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 LYG2Q86SG7 212 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 WFDC11Q8NEX6 87 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 OR2AK2Q8NG84 335 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 ZNF431Q8TF32 576 aaPredicted RBP6.72□□□□□ -1.33
USP4-210ENST00000483212 CHAC2Q8WUX2 184 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 RTN4IP1Q8WWV3 396 aaPredicted RBP6.72□□□□□ -1.33
USP4-210ENST00000483212 ST6GALNAC6Q969X2 333 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 ABHD14BQ96IU4 210 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 Q96MF0 132 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 TBX15Q96SF7 602 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 GPHA2Q96T91 129 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 REG4Q9BYZ8 158 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 SDHAF2Q9NX18 166 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 ONECUT1Q9UBC0 465 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 RNF150Q9ULK6 438 aa6.72□□□□□ -1.33
USP4-210ENST00000483212 C14orf166Q9Y224 244 aaKnown RBP6.72□□□□□ -1.33
USP4-210ENST00000483212 PRRC2AP48634 2157 aaKnown RBP6.72□□□□□ -1.33
USP4-210ENST00000483212 SAA2-SAA4A0A096LPE2 208 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 ODF3BA8MYP8 253 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 J3QR06 171 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 MPPED1O15442 326 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 SAA2P0DJI9 122 aaPredicted RBP6.71□□□□□ -1.34
USP4-210ENST00000483212 AKR1C4P17516 323 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 RAB7AP51149 207 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 BCAP31P51572 246 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 DVL1P1P54792 670 aaPredicted RBP6.71□□□□□ -1.34
USP4-210ENST00000483212 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 RPL30P62888 115 aaKnown RBP6.71□□□□□ -1.34
USP4-210ENST00000483212 PRB3Q04118 309 aaPredicted RBP6.71□□□□□ -1.34
USP4-210ENST00000483212 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 LDLRAD2Q5SZI1 272 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 METTL11BQ5VVY1 283 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 ZNF833PQ6ZTB9 187 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 VMO1Q7Z5L0 202 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 TBC1D26Q86UD7 250 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 ABHD12Q8N2K0 398 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.71□□□□□ -1.34
USP4-210ENST00000483212 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 BEND2Q8NDZ0 799 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 OR11H6Q8NGC7 330 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 OR4P4Q8NGL7 312 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 OR9G1Q8NH87 305 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 MITD1Q8WV92 249 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 GALNT14Q96FL9 552 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 TP53RKQ96S44 253 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 OR51J1Q9H342 316 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 NAA60Q9H7X0 242 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 METTL8Q9H825 291 aaKnown RBP6.71□□□□□ -1.34
USP4-210ENST00000483212 LPAR2Q9HBW0 351 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 SIRT7Q9NRC8 400 aa6.71□□□□□ -1.34
USP4-210ENST00000483212 ARHGAP32A7KAX9 2087 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 A0A0B4J2A0 478 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 hCG_1809904A0A1W2PP81 198 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 A0A1W2PPE2 198 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 A0A1W2PR64 198 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 A0A1W2PRV1 198 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 DBX1A6NMT0 343 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 LINC00473A8K010 186 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 B4DSR2 109 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 RNASEK-C17orf49H0YIS7 233 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 LY6LH3BQJ8 138 aa6.7□□□□□ -1.34
USP4-210ENST00000483212 RAB29O14966 203 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms