RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 GNB1P62873 340 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 RABEPKQ7Z6M1 372 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-205ENST00000483122 IL36GQ9NZH8 169 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 FER1L5A0AVI2 2057 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 ASCC3Q8N3C0 2202 aaKnown RBP10.03□□□□□ -0.8
VTI1A-205ENST00000483122 AQP7P3A6NL99 342 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 K7EP13 123 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 SH2D1BO14796 132 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 CRISP2P16562 243 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 KRTDAPP60985 99 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-205ENST00000483122 ZNF468Q5VIY5 522 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-205ENST00000483122 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 OR4B1Q8NGF8 309 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 PARD6GQ9BYG4 376 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-205ENST00000483122 SAMD10Q9BYL1 202 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 TUBG2Q9NRH3 451 aa10.03□□□□□ -0.8
VTI1A-205ENST00000483122 IGHV3-15A0A0B4J1V0 119 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 TRAV34A0A0B4J273 112 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 IGKV1-5P01602 117 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 SLC25A6P12236 298 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 HNF1AP20823 631 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 CD38P28907 300 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 SLC25A53Q5H9E4 307 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 C10orf128Q5T292 105 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 PLCXD3Q63HM9 321 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 TMEM42Q69YG0 159 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 OR5P3Q8WZ94 311 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 PIGCQ92535 297 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 BTF3L4Q96K17 158 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 LRRC61Q9BV99 259 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 ZNF552Q9H707 407 aaPredicted RBP10.02□□□□□ -0.81
VTI1A-205ENST00000483122 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 HS3ST3A1Q9Y663 406 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 TRAV39A0A0B4J263 110 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 ZNF816-ZNF321PA0A0X1KG74 233 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 HYPMO75409 117 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 NXPH2O95156 264 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 CD99P14209 185 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 CRYGSP22914 178 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 ATP5G3P48201 142 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 UBE2G2P60604 165 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 UBE2V1Q13404 147 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 Q6ZN92 141 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 Q6ZS49 121 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 BAGE3Q86Y29 109 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 BAGE2Q86Y30 109 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 ZNF611Q8N823 705 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 PSMF1Q92530 271 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
VTI1A-205ENST00000483122 IL36RNQ9UBH0 155 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 TIMM9Q9Y5J7 89 aa10.02□□□□□ -0.81
VTI1A-205ENST00000483122 CNTRLQ7Z7A1 2325 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 SPTY2D1-AS1A0A0U1RR47 76 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 DHHO43323 396 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 NDUFB4O95168 129 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 IGLC2P0DOY2 106 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 IGLC3P0DOY3 106 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 PTGDSP41222 190 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
VTI1A-205ENST00000483122 FUT6P51993 359 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 C1orf174Q8IYL3 243 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 OR1L3Q8NH93 324 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 TMEM54Q969K7 222 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 SFRP2Q96HF1 295 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 OR6C1Q96RD1 312 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 TXN2Q99757 166 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 UQCR10Q9UDW1 63 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 PATE4P0C8F1 98 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 BCL3P20749 454 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 RPS16P62249 146 aaKnown RBP10.01□□□□□ -0.81
VTI1A-205ENST00000483122 SUMO1P63165 101 aaKnown RBP10.01□□□□□ -0.81
VTI1A-205ENST00000483122 PSG4Q00888 419 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 TFF3Q07654 80 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 ATP6V1FQ16864 119 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 PCSK4Q6UW60 755 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 FOXL2NBQ6ZUU3 175 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 CADM4Q8NFZ8 388 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 APH1AQ96BI3 265 aa10.01□□□□□ -0.81
VTI1A-205ENST00000483122 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-205ENST00000483122 MDFIC2A0A1B0GVS7 189 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 TMPRSS2O15393 492 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 SYNGR4O95473 234 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 TOMM40O96008 361 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 KRASP01116 189 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 THBS3P49746 956 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 HINT1P49773 126 aaPredicted RBP10□□□□□ -0.81
VTI1A-205ENST00000483122 OR2M3Q8NG83 312 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 SGCZQ96LD1 299 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 RNF2Q99496 336 aa10□□□□□ -0.81
VTI1A-205ENST00000483122 MRPS17Q9Y2R5 130 aaKnown RBP10□□□□□ -0.81
VTI1A-205ENST00000483122 TRBV20OR9-2A0A075B6H5 130 aa9.99□□□□□ -0.81
VTI1A-205ENST00000483122 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
VTI1A-205ENST00000483122 CBR3O75828 277 aa9.99□□□□□ -0.81
VTI1A-205ENST00000483122 IGHV4-34P06331 123 aa9.99□□□□□ -0.81
VTI1A-205ENST00000483122 BLKP51451 505 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms