RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 AJUBAQ96IF1 538 aa10.71□□□□□ -0.69
HDAC1-208ENST00000482310 ZNF2Q9BSG1 426 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-208ENST00000482310 IFI27L2Q9H2X8 130 aa10.71□□□□□ -0.69
HDAC1-208ENST00000482310 TBL2Q9Y4P3 447 aaKnown RBP10.71□□□□□ -0.69
HDAC1-208ENST00000482310 FBN1P35555 2871 aaKnown RBP10.7□□□□□ -0.7
HDAC1-208ENST00000482310 SAA2-SAA4A0A096LPE2 208 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 IGHV3-72A0A0B4J1Y9 119 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 IGKV1D-13A0A0B4J2D9 117 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 LEUTXA8MZ59 168 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 HSD17B6O14756 317 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 RAB3DO95716 219 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 AMY2AP04746 511 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 IFNA6P05013 189 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 FBP1P09467 338 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 CSF1P09603 554 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 FAM157CP0CG43 387 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 SAA2P0DJI9 122 aaPredicted RBP10.7□□□□□ -0.7
HDAC1-208ENST00000482310 IGKV1-13P0DP09 117 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 CD24P25063 80 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 PTBP1P26599 531 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC1-208ENST00000482310 GPR12P47775 334 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 RAB13P51153 203 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
HDAC1-208ENST00000482310 ZNF45Q02386 682 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 BAK1Q16611 211 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 Q3ZCU0 254 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 SCGB2B2Q4G0G5 96 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 LDLRAD3Q86YD5 345 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 TMEM229BQ8NBD8 167 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 S100ZQ8WXG8 99 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 TRIM63Q969Q1 353 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 SDHCQ99643 169 aaPredicted RBP10.7□□□□□ -0.7
HDAC1-208ENST00000482310 MCUBQ9NWR8 336 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 DPM3Q9P2X0 92 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 ZNF221Q9UK13 617 aa10.7□□□□□ -0.7
HDAC1-208ENST00000482310 DIRAS3O95661 229 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 AKAIN1P0CW23 69 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 CEACAM3P40198 252 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 RAB7AP51149 207 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 LUMP51884 338 aaPredicted RBP10.69□□□□□ -0.7
HDAC1-208ENST00000482310 PPP5CP53041 499 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 BPIFB3P59826 476 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 SCGB2A2Q13296 93 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 DYRK1AQ13627 763 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 LY6EQ16553 131 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 ACTBL2Q562R1 376 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 RBMS3Q6XE24 437 aaKnown RBP10.69□□□□□ -0.7
HDAC1-208ENST00000482310 C9orf139Q6ZV77 190 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 OVCH2Q7RTZ1 564 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 MOB3BQ86TA1 216 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 ODF3L1Q8IXM7 274 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 TOMM5Q8N4H5 51 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 LINC00311Q8N616 119 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 GDPD1Q8N9F7 314 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 OR4C16Q8NGL9 310 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 OR56B4Q8NH76 319 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 RBMX2Q9Y388 322 aaKnown RBP10.69□□□□□ -0.7
HDAC1-208ENST00000482310 OR2W1Q9Y3N9 320 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 MINOS1-NBL1R4GNA1 71 aa10.69□□□□□ -0.7
HDAC1-208ENST00000482310 ANKRD20A5PA0PJZ0 165 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 HOXA3O43365 443 aaPredicted RBP10.68□□□□□ -0.7
HDAC1-208ENST00000482310 PPYP01298 95 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 IGHV4-59P01825 116 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 SSBP1Q04837 148 aaKnown RBP10.68□□□□□ -0.7
HDAC1-208ENST00000482310 BAMBIQ13145 260 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 ZNF846Q147U1 533 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 GLDNQ6ZMI3 551 aaPredicted RBP10.68□□□□□ -0.7
HDAC1-208ENST00000482310 TGIF2LXQ8IUE1 241 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 C8orf31Q8N9H6 132 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 DRAXINQ8NBI3 349 aaPredicted RBP10.68□□□□□ -0.7
HDAC1-208ENST00000482310 MALSU1Q96EH3 234 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 C5orf30Q96GV9 206 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 GPHA2Q96T91 129 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 SSX3Q99909 188 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 MRPL20Q9BYC9 149 aaKnown RBP10.68□□□□□ -0.7
HDAC1-208ENST00000482310 SLC5A7Q9GZV3 580 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 FXYD6Q9H0Q3 95 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 ABCB10Q9NRK6 738 aa10.68□□□□□ -0.7
HDAC1-208ENST00000482310 H3BUX3 64 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 M0R1X1 148 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 TIMM23O14925 209 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 RAB29O14966 203 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 TNFSF12O43508 249 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 TUSC2O75896 110 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 GAPDHP04406 335 aaKnown RBP10.67□□□□□ -0.7
HDAC1-208ENST00000482310 IL7P13232 177 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 PGAM2P15259 253 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 LINC00205P59089 165 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 KLF9Q13886 244 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-208ENST00000482310 LRRC75BQ2VPJ9 315 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 LY6G6FQ5SQ64 297 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 DRAM1Q8N682 238 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 OR6F1Q8NGZ6 308 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 ZNF418Q8TF45 676 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-208ENST00000482310 CAPSLQ8WWF8 208 aa10.67□□□□□ -0.7
HDAC1-208ENST00000482310 RTN4IP1Q8WWV3 396 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-208ENST00000482310 S1PR3Q99500 378 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms