RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZNF354AO60765 605 aaPredicted RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 TRBV12-3P01733 135 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 SERPINE1P05121 402 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 FGF7P21781 194 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 MYL9P24844 172 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 MT3P25713 68 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 AQP1P29972 269 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 CMPK1P30085 196 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 G6PCP35575 357 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 HSPA9P38646 679 aaKnown RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 VDAC2P45880 294 aaPredicted RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 SLC25A1P53007 311 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 RPS21P63220 83 aaKnown RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 SELENOWP63302 87 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 SLC38A11Q08AI6 406 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 TMEM267Q0VDI3 215 aaPredicted RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 PSG7Q13046 419 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 HTR4Q13639 388 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ARFRP1Q13795 201 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ZNF181Q2M3W8 571 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 TIMM50Q3ZCQ8 353 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 MORN2Q502X0 79 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 LDLRAD2Q5SZI1 272 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 FAM222AQ5U5X8 452 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ANKRD22Q5VYY1 191 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 LCN12Q6JVE5 192 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 LCN8Q6JVE9 175 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 UGT2A3Q6UWM9 527 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 CLEC19AQ6UXS0 136 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 Q6ZRU5 148 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ATP5L2Q7Z4Y8 100 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 PRNTQ86SH4 94 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 LRRTM1Q86UE6 522 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 PPP1R27Q86WC6 154 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 C9orf62Q8N4C0 152 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 KRTCAP2Q8N6L1 136 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ZNF615Q8N8J6 731 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 LY6G5BQ8NDX9 201 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 OR1L1Q8NH94 360 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 CT55Q8WUE5 264 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ORAOV1Q8WV07 137 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 SLC7A6Q92536 515 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 FAM3DQ96BQ1 224 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ZC2HC1AQ96GY0 325 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 PGLYRP2Q96PD5 576 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 HSD17B10Q99714 261 aaKnown RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 LXNQ9BS40 222 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 SNHG12Q9BXW3 62 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 OR2H1Q9GZK4 316 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 PDFQ9HBH1 243 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 HES4Q9HCC6 221 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 PRTFDC1Q9NRG1 225 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 CLCF1Q9UBD9 225 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 BAIAP2Q9UQB8 552 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 PXMP4Q9Y6I8 212 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 NPHP4O75161 1426 aaPredicted RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 SBF1O95248 1867 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 CITO14578 2027 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 ATG2AQ2TAZ0 1938 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 TRIP11Q15643 1979 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 IGHV3OR16-12A0A075B7B8 117 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 TMED7-TICAM2A0A0A6YYA0 188 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 IGHV3OR16-9A0A0B4J2B5 98 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 LOC107984640A0A0U1RRK4 108 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 EPOPA6NHQ4 379 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 CLDN25C9JDP6 229 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 H7BYZ3 331 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 SAP18O00422 153 aaKnown RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 SS18L1O75177 396 aaPredicted RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 NXPH4O95158 308 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 IFNA17P01571 189 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 HBZP02008 142 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 DBIP07108 87 aaKnown RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 VDAC1P21796 283 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 ATP5G3P48201 142 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 SLC18A1P54219 525 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 TAS2R46P59540 309 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 NCS1P62166 190 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 RPS25P62851 125 aaKnown RBP3.14□□□□□ -1.91
VPS41-212ENST00000482217 LAMTOR4Q0VGL1 99 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 DHRS2Q13268 280 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 CNPY1Q3B7I2 92 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 Q499Y3 187 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 AVPI1Q5T686 147 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 Q5XG85 94 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 FAAP20Q6NZ36 180 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 UNQ9165/PRO28630Q6UXU0 137 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 FBXW12Q6X9E4 464 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 SCGB1D4Q6XE38 83 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 ACP7Q6ZNF0 438 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 DNM1P46Q6ZS02 220 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 VN1R4Q7Z5H5 301 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 CDC20BQ86Y33 519 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 C11orf53Q8IXP5 236 aa3.14□□□□□ -1.91
VPS41-212ENST00000482217 C20orf196Q8IYI0 205 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms