RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 C9orf172C9J069 976 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 SYNGR2O43760 224 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 LILRA1O75019 489 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 NEURL1O76050 574 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 VASH2Q86V25 355 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 P2RX4Q99571 388 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 OR51B6Q9H340 312 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 NAT8Q9UHE5 227 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 FUT9Q9Y231 359 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 DOCK11Q5JSL3 2073 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 BDP1A6H8Y1 2624 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 HS3ST1O14792 307 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 DNPH1O43598 174 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 DEFA4P12838 97 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 GALR1P47211 349 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 TMEM241Q24JQ0 296 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 BSXQ3C1V8 233 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 ZDHHC23Q8IYP9 409 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 IL1F10Q8WWZ1 152 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 RDH5Q92781 318 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 LHX4Q969G2 390 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 OR1A1Q9P1Q5 309 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 UBE2L5PA0A1B0GUS4 154 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 SYNGR1O43759 233 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 MRPL33O75394 65 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 IGLV2-14P01704 120 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 SERPINA7P05543 415 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 MAGEA5P43359 124 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 FGF12P61328 243 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 SSPNQ14714 243 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 Q8NFD4 153 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 IL22RA2Q969J5 263 aa11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 NOL4LQ96MY1 436 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-208ENST00000479530 A0A1B0GUS0 222 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 PPP5D1E7EU14 171 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 G0S2P27469 103 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 LHX2P50458 406 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 PRDX4Q13162 271 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 COA6Q5JTJ3 125 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 MRPL30Q8TCC3 161 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 C1QTNF5Q9BXJ0 243 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 SLC25A22Q9H936 323 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 B4E171 279 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 H7BYZ3 331 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 IDH3GP51553 393 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 RIPPLY2Q5TAB7 128 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 TEX38Q6PEX7 206 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 PRR18Q8N4B5 295 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 OR2M7Q8NG81 312 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 PSMG3Q9BT73 122 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 PARLQ9H300 379 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 PPP1R3CQ9UQK1 317 aa11.27□□□□□ -0.61
PDZRN3-208ENST00000479530 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 KBTBD11O94819 623 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 ZNF16P17020 682 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 KIR2DS1Q14954 304 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 OR8G2PQ6IF36 304 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 ACSM6Q6P461 480 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 CBLN4Q9NTU7 201 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 OR2W1Q9Y3N9 320 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 SOX15O60248 233 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 CLDN18P56856 261 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 PAX5Q02548 391 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 SPSB4Q96A44 273 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 ARRDC1-AS1Q9H2J1 176 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 AURKAIP1Q9NWT8 199 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 ZNF391Q9UJN7 358 aa11.26□□□□□ -0.61
PDZRN3-208ENST00000479530 MBP02144 154 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 PCBD1P61457 104 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 SERF2P84101 59 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 COLCA1Q6ZS62 124 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 BEND2Q8NDZ0 799 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 OR10J5Q8NHC4 309 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 TMEM170AQ8WVE7 144 aa11.25□□□□□ -0.61
PDZRN3-208ENST00000479530 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms