RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SCTP09683 121 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 KIR2DS1Q14954 304 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 C5orf64Q2M2E5 130 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 VAX1Q5SQQ9 334 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 HES5Q5TA89 166 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 RNLSQ5VYX0 342 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 RNF152Q8N8N0 203 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 OR8U1Q8NH10 309 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 PHYHIPQ92561 330 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 ARHGAP5-AS1Q96IT6 56 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 GON7Q9BXV9 100 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 OR51J1Q9H342 316 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 GAB2Q9UQC2 676 aa13.54□□□□□ -0.24
ECHDC1-216ENST00000479525 A0A1W2PN81 502 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 RGS11O94810 467 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 BPNT1O95861 308 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 IGF1P05019 195 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 CD3GP09693 182 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 CT45A6P0DMU7 189 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 CT45A5P0DMU8 189 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 CT45A7P0DMV0 189 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 CALRP27797 417 aaKnown RBP13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 PPIFP30405 207 aaKnown RBP13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 CHRNA7P36544 502 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 ECI1P42126 302 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 TMEM50BP56557 158 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 HLA-DRB3P79483 266 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 DGCR2P98153 550 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 FABP5Q01469 135 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 STEAP3Q658P3 488 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 OR6M1Q8NGM8 313 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 OR5M8Q8NGP6 311 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 ABHD5Q8WTS1 349 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 C4orf3Q8WVX3 66 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 GPR61Q9BZJ8 451 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 STEAP1Q9UHE8 339 aa13.53□□□□□ -0.24
ECHDC1-216ENST00000479525 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 H7C2Y5 167 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 RGS10O43665 173 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 SOX15O60248 233 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 HLA-DRB1P01911 266 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 ARSBP15848 533 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 CEACAM6P40199 344 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 PLGLAQ15195 96 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 RAB11BQ15907 218 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 ZNF260Q3ZCT1 412 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 LIN54Q6MZP7 749 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 ZNF491Q8N8L2 437 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 ASCL2Q99929 193 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 PECRQ9BY49 303 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 C11orf54Q9H0W9 315 aaPredicted RBP13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 KIAA1456Q9P272 454 aa13.52□□□□□ -0.25
ECHDC1-216ENST00000479525 SMIM30A4D0T7 59 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 H0YJW9 148 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 SLC17A2O00624 439 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 HSPA12AO43301 675 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 SLC6A1P30531 599 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 SLURP1P55000 103 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 OR10A3P58181 314 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 ZNF554Q86TJ5 538 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 MAFIPQ8WZ33 124 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 DUSP21Q9H596 190 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 SCOCQ9UIL1 159 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 TPRKBQ9Y3C4 175 aa13.51□□□□□ -0.25
ECHDC1-216ENST00000479525 KMT2CQ8NEZ4 4911 aaKnown RBP13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 A0A0B4J203 849 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 IGKV1-6A0A0C4DH72 117 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 SHISA3A0PJX4 238 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 FOXI3A8MTJ6 420 aaPredicted RBP13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 I3L521 148 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 PROP1O75360 226 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 NDUFA3O95167 84 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 LY86O95711 162 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 IGHV3-11P01762 117 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 GSTP1P09211 210 aaKnown RBP13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 TPBGQ13641 420 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 MOGAT2Q3SYC2 334 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 PLAC9Q5JTB6 97 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 C9orf66Q5T8R8 295 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 OR1N2Q8NGR9 330 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 MYOZ3Q8TDC0 251 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 CNBD2Q96M20 576 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 B9D2Q9BPU9 175 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 URM1Q9BTM9 101 aaKnown RBP13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 Q9N2K0 584 aa13.5□□□□□ -0.25
ECHDC1-216ENST00000479525 A0A075B6Q4 140 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 TMEM272A0A1B0GTI8 110 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 RRHO14718 337 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 RAB29O14966 203 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 CD37P11049 281 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 CPEP16870 476 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 CRHBPP24387 322 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 RAB9AP51151 201 aa13.49□□□□□ -0.25
ECHDC1-216ENST00000479525 CX3CL1P78423 397 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms