RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 LRRC58Q96CX6 371 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 PACRGQ96M98 296 aaPredicted RBP3.21□□□□□ -1.9
RFC4-212ENST00000479307 JSRP1Q96MG2 331 aaPredicted RBP3.21□□□□□ -1.9
RFC4-212ENST00000479307 EBNA1BP2Q99848 306 aaKnown RBP3.21□□□□□ -1.9
RFC4-212ENST00000479307 MRPS26Q9BYN8 205 aaKnown RBP3.21□□□□□ -1.9
RFC4-212ENST00000479307 RNF122Q9H9V4 155 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 NECAP2Q9NVZ3 263 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 MS4A12Q9NXJ0 267 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 CCDC59Q9P031 241 aaKnown RBP3.21□□□□□ -1.9
RFC4-212ENST00000479307 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 TRAPPC4Q9Y296 219 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 SNX24Q9Y343 169 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 POLR3HQ9Y535 204 aaPredicted RBP3.21□□□□□ -1.9
RFC4-212ENST00000479307 ALG5Q9Y673 324 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 ARL5AQ9Y689 179 aa3.21□□□□□ -1.9
RFC4-212ENST00000479307 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 TRAV25A0A0B4J276 109 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 A0A0B4J2A0 478 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 C5orf63A6NC05 138 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 DPRXA6NFQ7 191 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SLC22A20A6NK97 555 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SERPINE3A8MV23 424 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 CLDN34H7C241 214 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 XKRYO14609 159 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 CHST10O43529 356 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 NBEAP1P0C6P0 100 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SMIM10L1P0DMW3 83 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 IGHV3-43DP0DP04 118 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 ZNF708P17019 499 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 IL12BP29460 328 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 RPL35P42766 123 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 RPS10P46783 165 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 ZNF140P52738 457 aaPredicted RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 CLDN18P56856 261 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 NCALDP61601 193 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 RPS15AP62244 130 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 IRF8Q02556 426 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 MADCAM1Q13477 382 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 PSG5Q15238 335 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 TAF1AQ15573 450 aaPredicted RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 BSXQ3C1V8 233 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 CCSMST1Q4G0I0 132 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 PIGGQ5H8A4 983 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 PLCXD3Q63HM9 321 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 RNASEKQ6P5S7 137 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 EIF3MQ7L2H7 374 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 SLC16A14Q7RTX9 510 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 RBM45Q8IUH3 476 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 PUSL1Q8N0Z8 303 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 STX19Q8N4C7 294 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 OR1M1Q8NGA1 313 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 OR4K15Q8NH41 348 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 NUBPLQ8TB37 319 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 ACTRT1Q8TDG2 376 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 GPR151Q8TDV0 419 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SRSF12Q8WXF0 261 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 L3HYPDHQ96EM0 354 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 RNF185Q96GF1 192 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SMIM10Q96HG1 83 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 PFDN5Q99471 154 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 ANKRD60Q9BZ19 345 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 FAM96AQ9H5X1 160 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 MRPL22Q9NWU5 206 aaKnown RBP3.2□□□□□ -1.9
RFC4-212ENST00000479307 SHPKQ9UHJ6 478 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SMPXQ9UHP9 88 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 SLC22A13Q9Y226 551 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 GOLT1BQ9Y3E0 138 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 MMACHCQ9Y4U1 282 aa3.2□□□□□ -1.9
RFC4-212ENST00000479307 LEUTXA8MZ59 168 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 E7EQL1 145 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 GOSR2O14653 212 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 PRMT5O14744 637 aaPredicted RBP3.19□□□□□ -1.9
RFC4-212ENST00000479307 MSMBP08118 114 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 SLC35G6P0C7Q6 338 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 OR56A5P0C7T3 313 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 TRAPPC2P0DI81 140 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 TRAPPC2BP0DI82 140 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 PSKH1P11801 424 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 UCHL3P15374 230 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 ME2P23368 584 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 RPA3P35244 121 aaPredicted RBP3.19□□□□□ -1.9
RFC4-212ENST00000479307 ARR3P36575 388 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 MAGEA3P43357 314 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 RPS5P46782 204 aaKnown RBP3.19□□□□□ -1.9
RFC4-212ENST00000479307 NMUP48645 174 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 RBP2P50120 134 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 AKR1D1P51857 326 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 NDUFA8P51970 172 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 FGF8P55075 233 aaPredicted RBP3.19□□□□□ -1.9
RFC4-212ENST00000479307 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 ERVS71-1P61550 626 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 MRPS22P82650 360 aaKnown RBP3.19□□□□□ -1.9
RFC4-212ENST00000479307 SLC25A11Q02978 314 aaKnown RBP3.19□□□□□ -1.9
RFC4-212ENST00000479307 TFDP2Q14188 446 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 PSG3Q16557 428 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 TAF9Q16594 264 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 ZBED5Q49AG3 693 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 CDNFQ49AH0 187 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 HSD17B12Q53GQ0 312 aa3.19□□□□□ -1.9
RFC4-212ENST00000479307 LCN12Q6JVE5 192 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms