RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 OR1E3Q8WZA6 343 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 CCL28Q9NRJ3 127 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 RNF186Q9NXI6 227 aa18.08■□□□□ 0.48
SDF4-206ENST00000478938 SLC17A3O00476 420 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 PRRX1P54821 245 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 HBG1P69891 147 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 HBG2P69892 147 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 SMIM21Q3B7S5 101 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 OR52L2PQ8NGH6 319 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 OR5B3Q8NH48 314 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 SARAFQ96BY9 339 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 KCNS1Q96KK3 526 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 GTF3C1Q12789 2109 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 TRBV20OR9-2A0A075B6H5 130 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 TMPRSS2O15393 492 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 CLRN1P58418 232 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 KIAA1644Q3SXP7 199 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 ASCL4Q6XD76 172 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 BATF2Q8N1L9 274 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 PNKDQ8N490 385 aa18.07■□□□□ 0.48
SDF4-206ENST00000478938 MUC22E2RYF6 1773 aaPredicted RBP18.06■□□□□ 0.48
SDF4-206ENST00000478938 IGKV1-27A0A075B6S5 117 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 CORTO00230 105 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 SLC31A1O15431 190 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 MPV17L2Q567V2 206 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 SPANXN5Q5MJ07 72 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 TSACCQ96A04 125 aaPredicted RBP18.06■□□□□ 0.48
SDF4-206ENST00000478938 ZC2HC1AQ96GY0 325 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 DEC1Q9P2X7 70 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 LOC102725191A0A1B0GVB3 256 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 SYNGR2O43760 224 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 HNRNPA2B1P22626 353 aaKnown RBP18.06■□□□□ 0.48
SDF4-206ENST00000478938 CAPZBP47756 277 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 TMEM108Q6UXF1 575 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 WDR5BQ86VZ2 330 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 PP6455Q8WZ26 134 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 HRASLS2Q9NWW9 162 aa18.06■□□□□ 0.48
SDF4-206ENST00000478938 TDRD6O60522 2096 aaKnown RBP18.06■□□□□ 0.48
SDF4-206ENST00000478938 C2orf72A6NCS6 295 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 CA2P00918 260 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 STUMQ69YW2 141 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 OR5D13Q8NGL4 314 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 TMEM234Q8WY98 164 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 NEUROG1Q92886 237 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 ST6GALNAC6Q969X2 333 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 CLEC1BQ9P126 229 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 CACNG5Q9UF02 275 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 A0A0J9YY10 115 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 A0A1W2PQU0 124 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 WFDC12Q8WWY7 111 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 RALGAPA1Q6GYQ0 2036 aa18.05■□□□□ 0.48
SDF4-206ENST00000478938 NCOA6Q14686 2063 aaPredicted RBP18.04■□□□□ 0.48
SDF4-206ENST00000478938 SLC22A20A6NK97 555 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 ALG1L2C9J202 215 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 NDUFS8O00217 210 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 SLC38A11Q08AI6 406 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 RNPS1Q15287 305 aaKnown RBP18.04■□□□□ 0.48
SDF4-206ENST00000478938 LILRA6Q6PI73 481 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 OR10G8Q8NGN5 311 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 MRPL13Q9BYD1 178 aaKnown RBP18.04■□□□□ 0.48
SDF4-206ENST00000478938 ZNF442Q9H7R0 627 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 FRG2CA6NGY1 282 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 H3BML4 177 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 TRAF3IP2O43734 574 aaPredicted RBP18.04■□□□□ 0.48
SDF4-206ENST00000478938 PIAS2O75928 621 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 NTF3P20783 257 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 TIMP3P35625 211 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 CST6Q15828 149 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 OR51H1Q8NH63 302 aa18.04■□□□□ 0.48
SDF4-206ENST00000478938 GMPPAQ96IJ6 420 aaPredicted RBP18.04■□□□□ 0.48
SDF4-206ENST00000478938 SF3B5Q9BWJ5 86 aaKnown RBP18.04■□□□□ 0.48
SDF4-206ENST00000478938 MYO7AQ13402 2215 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 SHISA8B8ZZ34 492 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 ZNF324O75467 553 aaPredicted RBP18.03■□□□□ 0.48
SDF4-206ENST00000478938 TOX4O94842 621 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 IGLV3-1P01715 115 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 IGLL1P15814 213 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 WNT16Q9UBV4 365 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 IGKV1-12A0A0C4DH73 117 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 SMPD2O60906 423 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 S1PR2O95136 353 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 IGKV1D-12P01611 117 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 CTXN2P0C2S0 81 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 ADIPOR1Q96A54 375 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 CLEC7AQ9BXN2 247 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 MYO9BQ13459 2157 aa18.03■□□□□ 0.48
SDF4-206ENST00000478938 SGCZQ96LD1 299 aa18.02■□□□□ 0.48
SDF4-206ENST00000478938 WASHC3Q9Y3C0 194 aa18.02■□□□□ 0.48
SDF4-206ENST00000478938 H0Y980 276 aa18.02■□□□□ 0.47
SDF4-206ENST00000478938 SPINK4O60575 86 aa18.02■□□□□ 0.47
SDF4-206ENST00000478938 FUT6P51993 359 aa18.02■□□□□ 0.47
SDF4-206ENST00000478938 GRB2P62993 217 aaKnown RBP18.02■□□□□ 0.47
SDF4-206ENST00000478938 OR2M7Q8NG81 312 aa18.02■□□□□ 0.47
SDF4-206ENST00000478938 APOBEC3DQ96AK3 386 aaPredicted RBP18.02■□□□□ 0.47
SDF4-206ENST00000478938 TMEM204Q9BSN7 226 aa18.02■□□□□ 0.47
SDF4-206ENST00000478938 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.47
SDF4-206ENST00000478938 SCTP09683 121 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 PSG2P11465 335 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 CD38P28907 300 aa18.01■□□□□ 0.47
SDF4-206ENST00000478938 PSG9Q00887 426 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms