RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 TESCQ96BS2 214 aa2.71□□□□□ -1.98
UPF3B-203ENST00000478840 OPTNQ96CV9 577 aa2.71□□□□□ -1.98
UPF3B-203ENST00000478840 C1QTNF6Q9BXI9 259 aa2.71□□□□□ -1.98
UPF3B-203ENST00000478840 ABCG5Q9H222 651 aa2.71□□□□□ -1.98
UPF3B-203ENST00000478840 WASHC3Q9Y3C0 194 aa2.71□□□□□ -1.98
UPF3B-203ENST00000478840 HDGFL3Q9Y3E1 203 aa2.71□□□□□ -1.98
UPF3B-203ENST00000478840 SEC16AO15027 2179 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 SMIM23A6NLE4 172 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 EEF1E1O43324 174 aaKnown RBP2.7□□□□□ -1.98
UPF3B-203ENST00000478840 SLC25A20O43772 301 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 DEDDO75618 318 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 STK16O75716 305 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 IL3P08700 152 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 IGHV3-30-3P0DP02 117 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 RNASE2P10153 161 aaKnown RBP2.7□□□□□ -1.98
UPF3B-203ENST00000478840 ZNF708P17019 499 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 MYL12AP19105 171 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 AKR1C2P52895 323 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 HERVK_113P63121 156 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 ITGB3BPQ13352 177 aaPredicted RBP2.7□□□□□ -1.98
UPF3B-203ENST00000478840 N4BP2L1Q5TBK1 243 aaPredicted RBP2.7□□□□□ -1.98
UPF3B-203ENST00000478840 ATP5L2Q7Z4Y8 100 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 TMEM161BQ8NDZ6 487 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 HES4Q9HCC6 221 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 ASF1BQ9NVP2 202 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 KMT2EQ8IZD2 1858 aa2.7□□□□□ -1.98
UPF3B-203ENST00000478840 C5orf49A4QMS7 147 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 OR4A8P0C604 315 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 SLC35A2P78381 396 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 LPCAT4Q643R3 524 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 NAA40Q86UY6 237 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 LYPD6Q86Y78 171 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 JOSD2Q8TAC2 188 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 Q8WTZ3 238 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 EEF1AKMT1Q8WVE0 214 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 C3orf18Q9UK00 162 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 DKKL1Q9UK85 242 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 DNAJC12Q9UKB3 198 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 BRD4O60885 1362 aaPredicted RBP2.69□□□□□ -1.98
UPF3B-203ENST00000478840 THSD7AQ9UPZ6 1657 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 ADAMTSL1Q8N6G6 1762 aa2.69□□□□□ -1.98
UPF3B-203ENST00000478840 PRR14LQ5THK1 2151 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 PLCH2O75038 1416 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 LINC00862A6NCI5 91 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 M0R036 132 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 MRASO14807 208 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 DCTN3O75935 186 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 CD7P09564 240 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 RPS12P25398 132 aaKnown RBP2.68□□□□□ -1.98
UPF3B-203ENST00000478840 DAPP51397 102 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 HLA-DRB3P79483 266 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 DEFA6Q01524 100 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 TSPAN31Q12999 210 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 ZNF141Q15928 474 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 CLVS2Q5SYC1 327 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 COMMD7Q86VX2 200 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 HS3ST5Q8IZT8 346 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 ZNF567Q8N184 647 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 RAD51AP1Q96B01 352 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 SLC25A44Q96H78 314 aaPredicted RBP2.68□□□□□ -1.98
UPF3B-203ENST00000478840 TM2D3Q9BRN9 247 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 UPK3BQ9BT76 320 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 MRPS26Q9BYN8 205 aaKnown RBP2.68□□□□□ -1.98
UPF3B-203ENST00000478840 GUCA1BQ9UMX6 200 aa2.68□□□□□ -1.98
UPF3B-203ENST00000478840 PCYT1BQ9Y5K3 369 aaPredicted RBP2.68□□□□□ -1.98
UPF3B-203ENST00000478840 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.67□□□□□ -1.98
UPF3B-203ENST00000478840 CALB1P05937 261 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 CRABP1P29762 137 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 OR10J1P30954 320 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 GNA13Q14344 377 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 MRPL51Q4U2R6 128 aaKnown RBP2.67□□□□□ -1.98
UPF3B-203ENST00000478840 SYPL2Q5VXT5 272 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 SCXQ7RTU7 201 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 ZNF664Q8N3J9 261 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 CCDC112Q8NEF3 446 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 OR8K1Q8NGG5 319 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 MUC7Q8TAX7 377 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 MS4A6EQ96DS6 147 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 CPNE2Q96FN4 548 aaPredicted RBP2.67□□□□□ -1.98
UPF3B-203ENST00000478840 TBX5Q99593 518 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 EMC3Q9P0I2 261 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 CARHSP1Q9Y2V2 147 aaKnown RBP2.67□□□□□ -1.98
UPF3B-203ENST00000478840 ALG5Q9Y673 324 aa2.67□□□□□ -1.98
UPF3B-203ENST00000478840 COL18A1P39060 1754 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 A8MWP6 167 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 PSCAO43653 123 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 SYNGR2O43760 224 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 MT-CO2P00403 227 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 IGKV1-17P01599 117 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 CA7P43166 264 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 JOSD1Q15040 202 aaPredicted RBP2.66□□□□□ -1.98
UPF3B-203ENST00000478840 DEFB134Q4QY38 66 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 ACSM3Q53FZ2 586 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 C1orf195Q5TG92 126 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 VPREB3Q9UKI3 123 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 CRB1P82279 1406 aa2.66□□□□□ -1.98
UPF3B-203ENST00000478840 SNAPC4Q5SXM2 1469 aa2.65□□□□□ -1.98
UPF3B-203ENST00000478840 NAV1Q8NEY1 1877 aa2.65□□□□□ -1.98
UPF3B-203ENST00000478840 KIF15Q9NS87 1388 aa2.65□□□□□ -1.98
UPF3B-203ENST00000478840 M0R381 172 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms