RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 THTPAQ9BU02 230 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 POTEKPQ9BYX7 375 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ANKRD60Q9BZ19 345 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 UCK2Q9BZX2 261 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 SLC38A1Q9H2H9 487 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 EFCAB1Q9HAE3 211 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 C12orf10Q9HB07 376 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 CACYBPQ9HB71 228 aaKnown RBP2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ISYNA1Q9NPH2 558 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ACER3Q9NUN7 267 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ARMC1Q9NVT9 282 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 EMC3Q9P0I2 261 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 TBC1D24Q9ULP9 559 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 PSG8Q9UQ74 426 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 POMPQ9Y244 141 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ST3GAL6Q9Y274 331 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF337Q9Y3M9 751 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 AP4S1Q9Y587 144 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 MALRD1Q5VYJ5 2156 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 HIVEP1P15822 2718 aa2.54□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF469Q96JG9 3925 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ALPK2Q86TB3 2170 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 A0A096LNJ9 63 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 A0A0J9YW62 118 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 C17orf51A8MQB3 221 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 BBIP1A8MTZ0 92 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 DEFB108AA8MXU0 73 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 GPR171O14626 319 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 NUPL2O15504 423 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 EIF1BO60739 113 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 PFDN1O60925 122 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 GCM2O75603 506 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 CPSF4O95639 269 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 BCHEP06276 602 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 OR12D1P0DN82 309 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 COX4I1P13073 169 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF32P17041 273 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 RAB3BP20337 219 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 LOXP28300 417 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MAS1LP35410 378 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 UGT2B10P36537 528 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 CDKN2CP42773 168 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 UBE2AP49459 152 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 POLR2HP52434 150 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 POLR2JP52435 117 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF138P52744 262 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 CRISP1P54107 249 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TMBIM6P55061 237 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 AQP5P55064 265 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 BNIP2Q12982 314 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MAB21L1Q13394 359 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 SPCS2Q15005 226 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TRAM2Q15035 370 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MAPK14Q16539 360 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MOGQ16653 247 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 THEM4Q5T1C6 240 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MRPL2Q5T653 305 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TSPO2Q5TGU0 170 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TNFAIP8L2Q6P589 184 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 EPGNQ6UW88 154 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TMPPEQ6ZT21 453 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 Q6ZT83 130 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF550Q7Z398 422 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ABHD12BQ7Z5M8 362 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 SLC30A8Q8IWU4 369 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF786Q8N393 782 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 C17orf78Q8N4C9 275 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 Q8N976 141 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 CNEP1R1Q8N9A8 125 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 Q8N9L7 120 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 NOXO1Q8NFA2 376 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 BPIFCQ8NFQ6 507 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 OR9G4Q8NGQ1 327 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF563Q8TA94 476 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MARCH1Q8TCQ1 289 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 GTF2H4Q92759 462 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 DDIT4LQ96D03 193 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 STARD4Q96DR4 205 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 GALNT14Q96FL9 552 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TEX37Q96LM6 180 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 PPP1R36Q96LQ0 422 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 PRRC1Q96M27 445 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 OR5B12Q96R08 314 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 OR52B2Q96RD2 323 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 OR52E6Q96RD3 313 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 HOPXQ9BPY8 73 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 MED18Q9BUE0 208 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 CHAC1Q9BUX1 264 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 RPP21Q9H633 154 aaKnown RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TMEM38AQ9H6F2 299 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ARMC7Q9H6L4 198 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 TPT1P8Q9HAU6 139 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 BCL2L10Q9HD36 194 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 PTTG3PQ9NZH4 202 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ANGPT4Q9Y264 503 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ZNF443Q9Y2A4 671 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-212ENST00000478573 AP3M1Q9Y2T2 418 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 CSMD2Q7Z408 3487 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 ABCA1O95477 2261 aa2.53□□□□□ -2
CDC42BPA-212ENST00000478573 USF3Q68DE3 2245 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms