RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SRP19P09132 144 aaKnown RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 CST2P09228 141 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 HOXC12P31275 282 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 RPL29P47914 159 aaKnown RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 P2RY6Q15077 328 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 DBX2Q6ZNG2 339 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 HEYLQ9NQ87 328 aaPredicted RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 BTBD17A6NE02 478 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 C1QTNF9BB2RNN3 333 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 MT-CO3P00414 261 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 GAPDHP04406 335 aaKnown RBP8.31□□□□□ -1.08
CMC1-209ENST00000477739 CCL11P51671 97 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 Q0VFX4 171 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 ICAM4Q14773 271 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 C16orf82Q7Z2V1 217 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 TCEAL7Q9BRU2 100 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 FOXD3Q9UJU5 478 aaPredicted RBP8.31□□□□□ -1.08
CMC1-209ENST00000477739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.31□□□□□ -1.08
CMC1-209ENST00000477739 ADAMTS9Q9P2N4 1935 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 LRRC3CA6NJW4 275 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 CTSSP25774 331 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 OR1C1Q15619 314 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 FAM201AQ5SY85 155 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 SSX7Q7RTT5 188 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 LHFPL4Q7Z7J7 247 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 LINC00469Q8N7U9 141 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 SGK494Q96LW2 274 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 KCNIP1Q9NZI2 227 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 IL17BQ9UHF5 180 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 TANC2Q9HCD6 1990 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 TACC2O95359 2948 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 IGKV1-6A0A0C4DH72 117 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 KIR2DS1A0A191URI9 304 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 hCG_38984A0A1B0GV85 526 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 NUDT19A8MXV4 375 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 H0Y8G0 127 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 ZG16O60844 167 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 SLC25A6P12236 298 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 F2RP25116 425 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 SSTR5P35346 364 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 KIR2DS4P43632 304 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 KIR2DS1Q14954 304 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 ELOBQ15370 118 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 ATP5SQ99766 215 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 ARV1Q9H2C2 271 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 OR51M1Q9H341 326 aa8.31□□□□□ -1.08
CMC1-209ENST00000477739 K7N7A8 449 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 MPZP25189 248 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 PMELP40967 661 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 TFF3Q07654 80 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 CRIP3Q6Q6R5 217 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 TCF23Q7RTU1 214 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 LFNGQ8NES3 379 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 FAM122AQ96E09 287 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 GNPNAT1Q96EK6 184 aaPredicted RBP8.3□□□□□ -1.08
CMC1-209ENST00000477739 RCC1LQ96I51 464 aaKnown RBP8.3□□□□□ -1.08
CMC1-209ENST00000477739 TAAR9Q96RI9 348 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 ZGRF1Q86YA3 2104 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 NCOR2Q9Y618 2525 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 DMXL1Q9Y485 3027 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 IGF2RP11717 2491 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 RPL36A-HNRNPH2H7BZ11 118 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 CLDN34H7C241 214 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 TIMM8AO60220 97 aaPredicted RBP8.3□□□□□ -1.08
CMC1-209ENST00000477739 FCGR3BO75015 233 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 WNT5AP41221 380 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 GALR1P47211 349 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 HBG1P69891 147 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 HBG2P69892 147 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 C10orf35Q96D05 121 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 IMMP2LQ96T52 175 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 IER2Q9BTL4 223 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 LYRM2Q9NU23 88 aaPredicted RBP8.3□□□□□ -1.08
CMC1-209ENST00000477739 TUBD1Q9UJT1 453 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 CASP6P55212 293 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 KIAA1644Q3SXP7 199 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 GGNQ86UU5 652 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 MDP1Q86V88 176 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 GINS3Q9BRX5 216 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 TM2D1Q9BX74 207 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 CBLN4Q9NTU7 201 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 COL12A1Q99715 3063 aa8.3□□□□□ -1.08
CMC1-209ENST00000477739 PQLC2LA1A4F0 135 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 ZNF716A6NP11 495 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 B4E171 279 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 DNPH1O43598 174 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 TSPAN7P41732 249 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 GNG10P50151 68 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 PDLIM3Q53GG5 364 aaPredicted RBP8.29□□□□□ -1.08
CMC1-209ENST00000477739 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 OR10G9Q8NGN4 311 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 OR10G7Q8NGN6 311 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 DERL1Q9BUN8 251 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 DLL3Q9NYJ7 618 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 DFFBO76075 338 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 NDUFB7P17568 137 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 DTYMKP23919 212 aa8.29□□□□□ -1.08
CMC1-209ENST00000477739 ECI1P42126 302 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms