RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TAS2R8Q9NYW2 309 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 ZNF107Q9UII5 783 aaPredicted RBP12.41□□□□□ -0.42
SEC13-215ENST00000477547 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 HSD17B6O14756 317 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 CD3DP04234 171 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 FCGR2CP31995 323 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 RFX2P48378 723 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 DYRK1AQ13627 763 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 KRTAP24-1Q3LI83 254 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
SEC13-215ENST00000477547 OR2D2Q9H210 308 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 DPM3Q9P2X0 92 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 RBM7Q9Y580 266 aaKnown RBP12.4□□□□□ -0.42
SEC13-215ENST00000477547 HILPDAQ9Y5L2 63 aa12.4□□□□□ -0.42
SEC13-215ENST00000477547 SAA2-SAA4A0A096LPE2 208 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 ANKRD20A5PA0PJZ0 165 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 TUSC2O75896 110 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 RAB3DO95716 219 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 PPYP01298 95 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 SAA2P0DJI9 122 aaPredicted RBP12.39□□□□□ -0.43
SEC13-215ENST00000477547 AADACP22760 399 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 PAX6P26367 422 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 ZNF137PP52743 207 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 HERV-K104P61576 105 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 SSX2Q16385 188 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 STEAP1BQ6NZ63 245 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 OVCH2Q7RTZ1 564 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 AJUBAQ96IF1 538 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 ZNF48Q96MX3 618 aaPredicted RBP12.39□□□□□ -0.43
SEC13-215ENST00000477547 SDHCQ99643 169 aaPredicted RBP12.39□□□□□ -0.43
SEC13-215ENST00000477547 TINAGL1Q9GZM7 467 aaPredicted RBP12.39□□□□□ -0.43
SEC13-215ENST00000477547 OR2W1Q9Y3N9 320 aa12.39□□□□□ -0.43
SEC13-215ENST00000477547 J3QRK9 145 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 CD74P04233 296 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 IFNA6P05013 189 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 OR8U9P0C7N5 309 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 AKAIN1P0CW23 69 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 GPR12P47775 334 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 REG1BP48304 166 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 INPP1P49441 399 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 FXYD4P59646 89 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 AP3S2P59780 193 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 TSPAN5P62079 268 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 ZNF846Q147U1 533 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 MEF2DQ14814 521 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 FAAP20Q6NZ36 180 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 TMEM17Q86X19 198 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 DYNAPQ8N1N2 210 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 TOMM5Q8N4H5 51 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 SIGLECL1Q8N7X8 197 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 OR4D10Q8NGI6 311 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 OR4C16Q8NGL9 310 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 OR8U1Q8NH10 309 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 MALSU1Q96EH3 234 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 ZNF2Q9BSG1 426 aaPredicted RBP12.38□□□□□ -0.43
SEC13-215ENST00000477547 FXYD6Q9H0Q3 95 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 PIPOXQ9P0Z9 390 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 ZNF221Q9UK13 617 aa12.38□□□□□ -0.43
SEC13-215ENST00000477547 IGKV1D-13A0A0B4J2D9 117 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 A0A1W2PPI3 338 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 OOSP1A8MZH6 123 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 LY6LH3BQJ8 138 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 RAB29O14966 203 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 AMY2AP04746 511 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 IGKV1-13P0DP09 117 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 IL7P13232 177 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 LUMP51884 338 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 ARHGDIBP52566 201 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 DIAPH2-AS1Q14236 149 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 BAK1Q16611 211 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 LDLRAD3Q86YD5 345 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 TGIF2LXQ8IUE1 241 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 ODF3L1Q8IXM7 274 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 ARRDC1Q8N5I2 433 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 CCDC32Q9BV29 185 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 RNF150Q9ULK6 438 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 TXNL1O43396 289 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 FAUP35544 74 aaKnown RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 ZNF816Q0VGE8 651 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 LRRC75BQ2VPJ9 315 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 RPL39P5Q59GN2 51 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 ZNF660Q6AZW8 331 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 FAM71F2Q6NXP2 309 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 ZNF833PQ6ZTB9 187 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 OR8H3Q8N146 312 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms