RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CST11Q9H112 138 aa7.36□□□□□ -1.23
COL4A5-204ENST00000477429 METTL9Q9H1A3 318 aa7.36□□□□□ -1.23
COL4A5-204ENST00000477429 ETAA1Q9NY74 926 aa7.36□□□□□ -1.23
COL4A5-204ENST00000477429 DNAH6Q9C0G6 4158 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 TRAV8-7A0A075B6U6 113 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 H0YJW9 148 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 SPINT2O43291 252 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 FADS2O95864 444 aaKnown RBP7.35□□□□□ -1.23
COL4A5-204ENST00000477429 CA2P00918 260 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 RPSAP08865 295 aaKnown RBP7.35□□□□□ -1.23
COL4A5-204ENST00000477429 PJVKQ0ZLH3 352 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 PMS2P11Q13670 270 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 DDI2Q5TDH0 399 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 DMKNQ6E0U4 476 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-204ENST00000477429 RAB12Q6IQ22 244 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 ACBD7Q8N6N7 88 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 BANF2Q9H503 90 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 AMBNQ9NP70 447 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
COL4A5-204ENST00000477429 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
COL4A5-204ENST00000477429 SHISA3A0PJX4 238 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 TMEM212A6NML5 194 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 SC5DO75845 299 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 IGKV1-16P04430 117 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 IGFBP3P17936 291 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-204ENST00000477429 GABRB1P18505 474 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 ZNF93P35789 620 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-204ENST00000477429 CD81P60033 236 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 PSG5Q15238 335 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 MRGPRG-AS1Q2M3A8 158 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 MPV17LQ2QL34 196 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-204ENST00000477429 AKIRIN2Q53H80 203 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 STEAP3Q658P3 488 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 ZDHHC13Q8IUH4 622 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 DRAXINQ8NBI3 349 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-204ENST00000477429 GRPEL2Q8TAA5 225 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 RFKQ969G6 155 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 TMEM106AQ96A25 262 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 MRPS24Q96EL2 167 aaKnown RBP7.34□□□□□ -1.23
COL4A5-204ENST00000477429 NEURL2Q9BR09 285 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 OVOL2Q9BRP0 275 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 ST6GALNAC5Q9BVH7 336 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 SRD5A3Q9H8P0 318 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 RANGRFQ9HD47 186 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-204ENST00000477429 OAZ3Q9UMX2 235 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 PEX16Q9Y5Y5 336 aa7.34□□□□□ -1.23
COL4A5-204ENST00000477429 FAT2Q9NYQ8 4349 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 SAC3D1A6NKF1 404 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 MCRIP1C9JLW8 97 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 H0Y980 276 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 YPEL1O60688 119 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 BAG2O95816 211 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 LALBAP00709 142 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 CSTBP04080 98 aaKnown RBP7.33□□□□□ -1.24
COL4A5-204ENST00000477429 MAS1P04201 325 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 LIMS3P0CW19 117 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 LIMS4P0CW20 117 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 SNRPGP62308 76 aaKnown RBP7.33□□□□□ -1.24
COL4A5-204ENST00000477429 RIPK1Q13546 671 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 ZIK1Q3SY52 487 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-204ENST00000477429 SLC25A30Q5SVS4 291 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 C6orf141Q5SZD1 244 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 C6orf183Q5T699 404 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 LINC00596Q86U02 117 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 GTSCR1Q86UQ5 136 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 SYS1Q8N2H4 156 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 TCTEX1D1Q8N7M0 179 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 POC5Q8NA72 575 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 MUL1Q969V5 352 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 ABHD14BQ96IU4 210 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 YPEL2Q96QA6 119 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 ZNF184Q99676 751 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-204ENST00000477429 TMEM138Q9NPI0 162 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 ZNF355PQ9NSJ1 428 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 METTL1Q9UBP6 276 aaKnown RBP7.33□□□□□ -1.24
COL4A5-204ENST00000477429 JPT1Q9UK76 154 aa7.33□□□□□ -1.24
COL4A5-204ENST00000477429 DYNC1H1Q14204 4646 aaKnown RBP7.32□□□□□ -1.24
COL4A5-204ENST00000477429 DNAH2Q9P225 4427 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 HSPG2P98160 4391 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 H3BNX3 289 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 BMPR1BO00238 502 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 MAGEB3O15480 346 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 APELAP0DMC3 54 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 GTF2F2P13984 249 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 HOXB6P17509 224 aaKnown RBP7.32□□□□□ -1.24
COL4A5-204ENST00000477429 ZP3P21754 424 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 RPS11P62280 158 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL4A5-204ENST00000477429 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
COL4A5-204ENST00000477429 HTD2P86397 168 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 ID3Q02535 119 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 PLGLAQ15195 96 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 LCN12Q6JVE5 192 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 PYHIN1Q6K0P9 492 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 ZNF343Q6P1L6 599 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 GLIPR1L1Q6UWM5 242 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 ZNF562Q6V9R5 426 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 Q8N402 240 aa7.32□□□□□ -1.24
COL4A5-204ENST00000477429 STX19Q8N4C7 294 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms