RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 FAM90A10PA6NDY2 464 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 FAM90A7PA6NKC0 464 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 FAM90A23PA8MXZ1 464 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 MRPS14O60783 128 aaKnown RBP9.04□□□□□ -0.96
VARS2-208ENST00000477052 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 CD1AP06126 327 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
VARS2-208ENST00000477052 RAB9AP51151 201 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 LINC00205P59089 165 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 ZNF616Q08AN1 781 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 TMEM30BQ3MIR4 351 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 STEAP3Q658P3 488 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 LIN54Q6MZP7 749 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 LRRTM1Q86UE6 522 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 OR2AK2Q8NG84 335 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 DLX4Q92988 240 aaPredicted RBP9.04□□□□□ -0.96
VARS2-208ENST00000477052 GALMQ96C23 342 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 ABHD14BQ96IU4 210 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 NEDD4LQ96PU5 975 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 FAM103A1Q9BTL3 118 aaKnown RBP9.04□□□□□ -0.96
VARS2-208ENST00000477052 NDUFA13Q9P0J0 144 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
VARS2-208ENST00000477052 VSIG4Q9Y279 399 aa9.04□□□□□ -0.96
VARS2-208ENST00000477052 A0A1W2PN81 502 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 YPEL1O60688 119 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CA11O75493 328 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 IGHV3-11P01762 117 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 HLA-DRB1P01911 266 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 GLAP06280 429 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CT45A6P0DMU7 189 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CT45A5P0DMU8 189 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CT45A7P0DMV0 189 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 OR5H8P0DN80 308 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 EGR2P11161 476 aaPredicted RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 CHRNA7P36544 502 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 RPS27AP62979 156 aaKnown RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 HTD2P86397 168 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 UNC119Q13432 240 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 P2RY14Q15391 338 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 SPHARQ15513 63 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 HMGN3Q15651 99 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 TBCEQ15813 527 aaPredicted RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 SBSPONQ8IVN8 264 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CDH26Q8IXH8 852 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 DRAXINQ8NBI3 349 aaPredicted RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 MINDY2Q8NBR6 621 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 ABHD5Q8WTS1 349 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 MS4A10Q96PG2 267 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 YPEL2Q96QA6 119 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 UQCC2Q9BRT2 126 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CCDC90BQ9GZT6 254 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 CHMP1AQ9HD42 196 aaPredicted RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 GAR1Q9NY12 217 aaKnown RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 OR1A1Q9P1Q5 309 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 RNF150Q9ULK6 438 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
VARS2-208ENST00000477052 STAB2Q8WWQ8 2551 aa9.03□□□□□ -0.96
VARS2-208ENST00000477052 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 A0A087WW49 117 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 OVOL1O14753 267 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 SOCS1O15524 211 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 SAP30O75446 220 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 OR8U8P0C7N1 319 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 SPNP16150 400 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 CX3CL1P78423 397 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 PLGLAQ15195 96 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 MED22Q15528 200 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 C19orf54Q5BKX5 351 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 CEACAM19Q7Z692 300 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 SVOPQ8N4V2 548 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 NKAIN3Q8N8D7 197 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 NPBQ8NG41 125 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 ARPC1AQ92747 370 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 TMEM203Q969S6 136 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 TMEM59Q9BXS4 323 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 CST11Q9H112 138 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 ABRACLQ9P1F3 81 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 KIAA1456Q9P272 454 aa9.02□□□□□ -0.97
VARS2-208ENST00000477052 H7C2Y5 167 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 RRHO14718 337 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 RGS11O94810 467 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 NDUFA3O95167 84 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 MAPK3P27361 379 aaPredicted RBP9.01□□□□□ -0.97
VARS2-208ENST00000477052 QRFPP83859 136 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 RUNX1Q01196 453 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 C1orf100Q5SVJ3 147 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 GFI1Q99684 422 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 TPSG1Q9NRR2 321 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 STEAP1Q9UHE8 339 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 SLC23A1Q9UHI7 598 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 AK3Q9UIJ7 227 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 ZNF580Q9UK33 172 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 SMAD5-AS1Q9Y6J3 95 aa9.01□□□□□ -0.97
VARS2-208ENST00000477052 SORL1Q92673 2214 aa9□□□□□ -0.97
VARS2-208ENST00000477052 DPPA5A6NC42 116 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms