RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CRLF2Q9HC73 371 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 TAS2R1Q9NYW7 299 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF492Q9P255 531 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF230Q9UIE0 474 aaPredicted RBP2.33□□□□□ -2.04
PTCD3-211ENST00000476215 PSMD13Q9UNM6 376 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 TFR2Q9UP52 801 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 CARHSP1Q9Y2V2 147 aaKnown RBP2.33□□□□□ -2.04
PTCD3-211ENST00000476215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ARL5AQ9Y689 179 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 CREBBPQ92793 2442 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 MYO9AB2RTY4 2548 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 DOPEY2Q9Y3R5 2298 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 CNTRLQ7Z7A1 2325 aa2.33□□□□□ -2.04
PTCD3-211ENST00000476215 ANKRD36A6QL64 1941 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 SCN8AQ9UQD0 1980 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 SPTBP11277 2137 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 IZUMO1RA6ND01 250 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 C21orf140B9A014 251 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 MKRN2OSH3BPM6 223 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 APOC4-APOC2K7ER74 178 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 NDUFS5O43920 106 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 FSTL3O95633 263 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 APOC2P02655 101 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR5AC1P0C628 307 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 SEC11BP0C7V7 166 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 PAX6P26367 422 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 SPAM1P38567 509 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 CAPZBP47756 277 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 CD151P48509 253 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 MARCKSL1P49006 195 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 RWDD2BP57060 319 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR12D2P58182 307 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 SLC35B1P78383 322 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 TAF1AQ15573 450 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-211ENST00000476215 FBXL19-AS1Q494R0 122 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 DEFB134Q4QY38 66 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 CLEC18BQ6UXF7 455 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 GLT6D1Q7Z4J2 308 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 LINC00523Q86TU6 105 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR4E2Q8NGC2 313 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR4D6Q8NGJ1 314 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR13C4Q8NGS5 318 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 ACTL9Q8TC94 416 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 CT55Q8WUE5 264 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 NAT14Q8WUY8 206 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 ORAOV1Q8WV07 137 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 LCN9Q8WX39 176 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 DCUN1D1Q96GG9 259 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 QKIQ96PU8 341 aaKnown RBP eCLIP2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR52A5Q9H2C5 316 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 FAM96AQ9H5X1 160 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 KIR3DX1Q9H7L2 352 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 TRIM45Q9H8W5 580 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-211ENST00000476215 OR2S2Q9NQN1 319 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 INIPQ9NRY2 104 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 IMP3Q9NV31 184 aaKnown RBP2.32□□□□□ -2.04
PTCD3-211ENST00000476215 NLE1Q9NVX2 485 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-211ENST00000476215 ORC6Q9Y5N6 252 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 POLQO75417 2590 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 APCP25054 2843 aa2.32□□□□□ -2.04
PTCD3-211ENST00000476215 POLEQ07864 2286 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 DCHS2Q6V1P9 2916 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 DOPEY1Q5JWR5 2465 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ABCA12Q86UK0 2595 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 SETD2Q9BYW2 2564 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ZFC3H1O60293 1989 aaKnown RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 NIPBLQ6KC79 2804 aaeCLIP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 TLCD2A6NGC4 264 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 CCL22O00626 93 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF189O75820 626 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 KLF7O75840 302 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 HRES1P13985 223 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 SRMP19623 302 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF140P52738 457 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 MEF2CQ06413 473 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 TRMT10CQ7L0Y3 403 aaKnown RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 LRP11Q86VZ4 500 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 OOSP2Q86WS3 158 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 FAM57AQ8TBR7 257 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 RBPMSQ93062 196 aaKnown RBP2.31□□□□□ -2.04
PTCD3-211ENST00000476215 LRRC45Q96CN5 670 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 PPP1R2P1Q96PQ5 205 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF649Q9BS31 505 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 CHRNA10Q9GZZ6 450 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 XKR8Q9H6D3 395 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 LZTFL1Q9NQ48 299 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ZNF586Q9NXT0 402 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 BTRCQ9Y297 605 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 CACNA1DQ01668 2161 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 MED13Q9UHV7 2174 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ZFHX3Q15911 3703 aa2.31□□□□□ -2.04
PTCD3-211ENST00000476215 ESPL1Q14674 2120 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 ICE1Q9Y2F5 2266 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 TEP1Q99973 2627 aaKnown RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 SLC5A10A0PJK1 596 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 ARGFXA6NJG6 315 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 C2orf74A8MZ97 194 aa2.3□□□□□ -2.04
PTCD3-211ENST00000476215 MIF4GDA9UHW6 222 aaKnown RBP2.3□□□□□ -2.04
PTCD3-211ENST00000476215 C4orf51C9J302 202 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms